Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6457 |
Symbol | |
ID | 5320760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 105041 |
End bp | 105517 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640778022 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001314954 |
Protein GI | 150378360 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.545436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAGT CTCCCACAGA GGATGTCGAT AGGATAGACC TTAAGATTTT GCGCGCCTTG CAATCGGAGG GCCGGCTCAG CAATGCCGAT CTCGCCGAGC GCGTGAATGT CAGTGCTGCA ACTTGCCACA GGCGAACTCA GCGCCTCTTC GAGGAGGGCT ACATTACCGG CGTGCGGGCG GAAGTCTCGC CGGGGGCCGT AGGCCTCGGC GCGATGGTTA TGGTTGGCGT GGTACTGGAT CGCTCCACGC CTGAGAGCTT TGGTGCCTTT GAGGGCGCGG TCATGGAGCT GAAGGAAGTA CTGGACTGCA ATTTGGTCGC CGGAGATTTC GATTATCTCC TGAAAATACG CGTCCGCGAC ATGGCCGATT TCAACAAGCT ACACGGCCAG AAGCTGATCG CCCTTCCAGG CGTGCGCCAA ACGCGCACCT TCTTCGTGAT GAAGGAAGTC AAGGAGAACG CGAGGTTGCC CTTCTAG
|
Protein sequence | MKESPTEDVD RIDLKILRAL QSEGRLSNAD LAERVNVSAA TCHRRTQRLF EEGYITGVRA EVSPGAVGLG AMVMVGVVLD RSTPESFGAF EGAVMELKEV LDCNLVAGDF DYLLKIRVRD MADFNKLHGQ KLIALPGVRQ TRTFFVMKEV KENARLPF
|
| |