| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3597 |
|---|
| Symbol | |
|---|
| ID | 4786123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3806577 |
|---|
| End bp | 3807098 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640092179 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001022785 |
|---|
| Protein GI | 124268781 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.680866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGCAA CAAAAGTTCG TCAATGTGTC GCGCCCTCTC GTGCGACGAC ACCACCGCCC
CCGGCGAGCC TGGACCGCAC CGACAAGGCC ATCCTGCGGG CGCTGCAGCG CGACGCCTCG
GTGTCGAACG TGGCGCTGGC CGCCAAGGTG AACCTCAGCG CGCCGGCCTG CCTGCGCCGC
GTCGAGCGGC TCAAGCAGGC GGGGCTGATC AAGGGCATCG TCGCGCTGCT GAACCCGGCC
GCGCTGGACG CCGGCATGCT GGTGATGATC GGCGTGGTGC TGGACCGCTC CACACCCGAC
TCCTTCGCCG ACTTCGAGAA GGCCGCCGCC CGGGTGTCGG GCTGCATGGA GTGCCACGTG
GTGACCGGCG AGTTCGACTA CTTCATGCTG GTGCGCACGC GCGACAACGA CAGCTTCAAT
CGCCTGCATG CCGAGCAGCT GCTGCACCTG CCGGGCGTGC GACAGATCCG CTCGTTCATG
GTGCTCAAGC AGGTGCTGTC GACGACGCAG TTTCCGGTTT GA
|
|---|
| Protein sequence | MCATKVRQCV APSRATTPPP PASLDRTDKA ILRALQRDAS VSNVALAAKV NLSAPACLRR
VERLKQAGLI KGIVALLNPA ALDAGMLVMI GVVLDRSTPD SFADFEKAAA RVSGCMECHV
VTGEFDYFML VRTRDNDSFN RLHAEQLLHL PGVRQIRSFM VLKQVLSTTQ FPV
|
|---|
| |