Gene Aave_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3320 
Symbol 
ID4667503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3669425 
End bp3669937 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID639824518 
ProductAsnC family transcriptional regulator 
Protein accessionYP_971654 
Protein GI120611976 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0097323 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTT CACTATGGAT CGGAGGTAAC GTGGATGAAA TCGATAGGGT GGACCGCAGA 
ATCCTGGCAA TCCTGCAGGA CGACGGCCGC ATCTCCAACA TCAAGCTCGC CGAACGAGTC
GCCCTGTCGC CCACCGCCGT GCTCGCGCGG GTGCAGCGGC TCACGCGCGA GGGCTACATC
CTGGGCTACG AGGCGCGGCT CAATCCGCAG AAACTCGGCG CCGGCATGCT CGTGTTCGTC
GAGGTGCTGC TGGACCGCAC CACGCCCAAC GTGTTCGACC AGTTCAAGGC CGCGGTGCAG
GTCCACCCGG CCATCATGGA GTGCCACATG GTGGCGGGCG GTTTCGATTA CCTGCTCAAG
ACCCGGCAGG CCGACATGAA CGCCTACCGG CAGTTCGCCG GAGAGGTGCT GTGGCAACTG
CCCGGCGTGC GCGAAACGCG CACCTATGCG GTGATGGAAG AGGTCAAGCA CTCCTTCCAT
CTCGCGCTGG ACGAACGCGC CGCGCGCTCC TGA
 
Protein sequence
MNVSLWIGGN VDEIDRVDRR ILAILQDDGR ISNIKLAERV ALSPTAVLAR VQRLTREGYI 
LGYEARLNPQ KLGAGMLVFV EVLLDRTTPN VFDQFKAAVQ VHPAIMECHM VAGGFDYLLK
TRQADMNAYR QFAGEVLWQL PGVRETRTYA VMEEVKHSFH LALDERAARS