More than 300 homologs were found in PanDaTox collection
for query gene Plav_2822 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_2822  AsnC family transcriptional regulator  100 
 
 
158 aa  320  5e-87  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.217238  normal  0.448359 
 
 
-
 
NC_009622  Smed_6457  AsnC family transcriptional regulator  74.68 
 
 
158 aa  244  3e-64  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.545436 
 
 
-
 
NC_011894  Mnod_5478  transcriptional regulator, AsnC family  72 
 
 
159 aa  213  7e-55  Methylobacterium nodulans ORS 2060  Bacteria  hitchhiker  0.00532694  n/a   
 
 
-
 
NC_011988  Avi_5854  transcriptional regulator AsnC family  68.87 
 
 
154 aa  212  9.999999999999999e-55  Agrobacterium vitis S4  Bacteria  normal  0.283815  n/a   
 
 
-
 
NC_009485  BBta_4128  AsnC family transcriptional regulator  64.56 
 
 
158 aa  212  1.9999999999999998e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.472167 
 
 
-
 
NC_010511  M446_0270  AsnC family transcriptional regulator  68.46 
 
 
153 aa  203  7e-52  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0235772 
 
 
-
 
NC_010505  Mrad2831_1520  AsnC family transcriptional regulator  63.69 
 
 
161 aa  194  4.0000000000000005e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.186133 
 
 
-
 
NC_010682  Rpic_2003  transcriptional regulator, AsnC family  48.05 
 
 
173 aa  151  4e-36  Ralstonia pickettii 12J  Bacteria  normal  0.647714  normal 
 
 
-
 
NC_012856  Rpic12D_1696  transcriptional regulator, AsnC family  48.05 
 
 
173 aa  151  4e-36  Ralstonia pickettii 12D  Bacteria  normal  0.346249  normal 
 
 
-
 
NC_011992  Dtpsy_3149  transcriptional regulator, AsnC family  50.67 
 
 
169 aa  149  1e-35  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3876  AsnC family transcriptional regulator  50.67 
 
 
191 aa  149  1e-35  Acidovorax sp. JS42  Bacteria  normal  normal  0.990954 
 
 
-
 
NC_009636  Smed_2574  AsnC family transcriptional regulator  46 
 
 
154 aa  143  7.0000000000000006e-34  Sinorhizobium medicae WSM419  Bacteria  normal  0.0518335  normal  0.327443 
 
 
-
 
NC_010676  Bphyt_5396  transcriptional regulator, AsnC family  46.36 
 
 
175 aa  143  9e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.1611  normal  0.0284366 
 
 
-
 
NC_009078  BURPS1106A_A1797  putative leucine-responsive regulatory protein  46 
 
 
152 aa  142  2e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0951  putative leucine-responsive regulatory protein  46 
 
 
169 aa  142  2e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  0.191831  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0345  Lrp regulator  46 
 
 
169 aa  142  2e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1881  putative leucine-responsive regulatory protein  46 
 
 
169 aa  142  2e-33  Burkholderia pseudomallei 668  Bacteria  normal  0.112233  n/a   
 
 
-
 
NC_008784  BMASAVP1_0428  putative leucine-responsive regulatory protein  46 
 
 
152 aa  142  2e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.749844  n/a   
 
 
-
 
NC_008835  BMA10229_0217  putative leucine-responsive regulatory protein  46 
 
 
169 aa  142  2e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1387  putative leucine-responsive regulatory protein  46 
 
 
152 aa  142  2e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  0.292932  n/a   
 
 
-
 
NC_008709  Ping_3606  transcriptional regulator of AsnC/Lrp family protein  48.65 
 
 
155 aa  141  3e-33  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05577  transcription regulator protein  46.05 
 
 
186 aa  140  5e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  0.47707  normal  0.300732 
 
 
-
 
NC_008825  Mpe_A3749  AsnC family transcriptional regulator  47.68 
 
 
181 aa  140  9e-33  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.648242 
 
 
-
 
NC_008752  Aave_4492  AsnC family transcriptional regulator  47.33 
 
 
178 aa  140  9.999999999999999e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.104876 
 
 
-
 
NC_008825  Mpe_A3597  AsnC family transcriptional regulator  45.7 
 
 
173 aa  139  9.999999999999999e-33  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.680866 
 
 
-
 
NC_012791  Vapar_5098  transcriptional regulator, AsnC family  47.33 
 
 
169 aa  139  9.999999999999999e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1100  leucine-responsive regulatory protein, putative  45.33 
 
 
169 aa  139  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  0.121035  n/a   
 
 
-
 
NC_010623  Bphy_5406  AsnC family transcriptional regulator  44.67 
 
 
169 aa  139  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3375  AsnC family transcriptional regulator  45.64 
 
 
166 aa  138  3e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4141  AsnC family transcriptional regulator  45.64 
 
 
166 aa  138  3e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.845485  normal 
 
 
-
 
NC_008061  Bcen_4793  AsnC family transcriptional regulator  45.64 
 
 
166 aa  138  3e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00893  DNA-binding transcriptional dual regulator, leucine-binding  45.91 
 
 
164 aa  136  1e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2754  transcriptional regulator, AsnC family  45.91 
 
 
164 aa  136  1e-31  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000328569  n/a   
 
 
-
 
NC_009800  EcHS_A0994  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Escherichia coli HS  Bacteria  decreased coverage  0.0000000000000266294  n/a   
 
 
-
 
NC_010658  SbBS512_E2439  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000000889772  n/a   
 
 
-
 
NC_010498  EcSMS35_2231  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000028804  normal 
 
 
-
 
NC_012892  B21_00900  hypothetical protein  45.91 
 
 
164 aa  136  1e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1986  leucine-responsive transcriptional regulator  46.62 
 
 
164 aa  136  1e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  0.64528  n/a   
 
 
-
 
NC_011353  ECH74115_1051  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000229844  normal 
 
 
-
 
NC_010468  EcolC_2707  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000640359  normal 
 
 
-
 
NC_009436  Ent638_1413  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Enterobacter sp. 638  Bacteria  decreased coverage  0.0000135875  normal 
 
 
-
 
NC_009801  EcE24377A_0964  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  136  1e-31  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000271902  n/a   
 
 
-
 
NC_011083  SeHA_C1058  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  135  2e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  decreased coverage  0.000658641  normal 
 
 
-
 
NC_011205  SeD_A1024  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  135  2e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000719526  normal 
 
 
-
 
NC_012880  Dd703_2261  leucine-responsive transcriptional regulator  46.62 
 
 
164 aa  135  2e-31  Dickeya dadantii Ech703  Bacteria  normal  0.0124412  n/a   
 
 
-
 
NC_011149  SeAg_B0964  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  135  2e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000969196  n/a   
 
 
-
 
NC_011080  SNSL254_A0993  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  135  2e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000182939  normal 
 
 
-
 
NC_012917  PC1_1718  leucine-responsive transcriptional regulator  46.62 
 
 
164 aa  135  2e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.159084  n/a   
 
 
-
 
NC_013456  VEA_003880  leucine-responsive regulatory protein  45.95 
 
 
164 aa  135  2e-31  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00000693258  n/a   
 
 
-
 
NC_011094  SeSA_A1073  leucine-responsive transcriptional regulator  45.91 
 
 
164 aa  135  2e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000166195  normal 
 
 
-
 
NC_012912  Dd1591_2361  leucine-responsive transcriptional regulator  46.62 
 
 
164 aa  135  2e-31  Dickeya zeae Ech1591  Bacteria  normal  0.84534  n/a   
 
 
-
 
NC_009832  Spro_1682  leucine-responsive transcriptional regulator  46.62 
 
 
164 aa  135  3.0000000000000003e-31  Serratia proteamaculans 568  Bacteria  normal  0.94162  normal  0.324618 
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  45.83 
 
 
167 aa  135  3.0000000000000003e-31  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
NC_009783  VIBHAR_01796  leucine-responsive transcriptional regulator  45.95 
 
 
164 aa  135  3.0000000000000003e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_1742  leucine-responsive transcriptional regulator  43.51 
 
 
166 aa  135  3.0000000000000003e-31  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00000000110042  n/a   
 
 
-
 
NC_011365  Gdia_1385  transcriptional regulator, AsnC family  46.84 
 
 
158 aa  135  3.0000000000000003e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.990948  normal 
 
 
-
 
NC_004578  PSPTO_0100  leucine-responsive regulatory protein  44.59 
 
 
162 aa  134  4e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0234  regulatory proteins, AsnC/Lrp  44.94 
 
 
162 aa  134  6.0000000000000005e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1494  leucine-responsive transcriptional regulator  45.28 
 
 
164 aa  134  6.0000000000000005e-31  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000000974852  n/a   
 
 
-
 
NC_007948  Bpro_3829  AsnC family transcriptional regulator  46.31 
 
 
154 aa  134  6.0000000000000005e-31  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  44.37 
 
 
165 aa  133  9e-31  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_011071  Smal_0443  transcriptional regulator, AsnC family  46.67 
 
 
159 aa  133  9e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  133  9.999999999999999e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  133  9.999999999999999e-31  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  43.79 
 
 
168 aa  133  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_007952  Bxe_B0870  AsnC family transcriptional regulator  41.67 
 
 
169 aa  132  1.9999999999999998e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.592101  normal  0.410533 
 
 
-
 
NC_009439  Pmen_0244  AsnC family transcriptional regulator  43.59 
 
 
162 aa  132  1.9999999999999998e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3619  transcriptional regulator, AsnC family  43.59 
 
 
174 aa  132  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  normal  0.378157  n/a   
 
 
-
 
NC_008760  Pnap_4759  AsnC family transcriptional regulator  44.3 
 
 
154 aa  131  3e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1045  AsnC family transcriptional regulator  46.36 
 
 
155 aa  131  3e-30  Caulobacter sp. K31  Bacteria  normal  0.596576  normal  0.823935 
 
 
-
 
NC_007948  Bpro_0399  AsnC family transcriptional regulator  45.95 
 
 
159 aa  132  3e-30  Polaromonas sp. JS666  Bacteria  normal  normal  0.318604 
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  44.37 
 
 
167 aa  132  3e-30  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_009708  YpsIP31758_2597  leucine-responsive transcriptional regulator  45.27 
 
 
164 aa  131  3.9999999999999996e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000282665  n/a   
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  43.71 
 
 
167 aa  131  3.9999999999999996e-30  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_007492  Pfl01_5527  AsnC family transcriptional regulator  43.87 
 
 
162 aa  131  3.9999999999999996e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.414864 
 
 
-
 
NC_010159  YpAngola_A1612  leucine-responsive transcriptional regulator  45.27 
 
 
164 aa  131  3.9999999999999996e-30  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000163573  normal 
 
 
-
 
NC_010465  YPK_2686  leucine-responsive transcriptional regulator  45.27 
 
 
164 aa  131  3.9999999999999996e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_009656  PSPA7_6082  leucine-responsive regulatory protein  43.59 
 
 
162 aa  131  3.9999999999999996e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70080  leucine-responsive regulatory protein  43.59 
 
 
162 aa  131  3.9999999999999996e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_48000  leucin responsive regulatory protein  44.23 
 
 
162 aa  130  5e-30  Azotobacter vinelandii DJ  Bacteria  normal  0.964771  n/a   
 
 
-
 
NC_011312  VSAL_I1840  leucine-responsive transcriptional regulator  43.67 
 
 
163 aa  130  6.999999999999999e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.757131  n/a   
 
 
-
 
NC_010322  PputGB1_5323  AsnC family transcriptional regulator  43.31 
 
 
162 aa  130  7.999999999999999e-30  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0644813 
 
 
-
 
NC_010501  PputW619_0199  AsnC family transcriptional regulator  43.31 
 
 
162 aa  130  7.999999999999999e-30  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00074926 
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  42.48 
 
 
167 aa  130  9e-30  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_011992  Dtpsy_1428  transcriptional regulator, AsnC family  46.62 
 
 
159 aa  129  1.0000000000000001e-29  Acidovorax ebreus TPSY  Bacteria  normal  0.92008  n/a   
 
 
-
 
NC_008782  Ajs_2419  AsnC family transcriptional regulator  46.62 
 
 
159 aa  129  1.0000000000000001e-29  Acidovorax sp. JS42  Bacteria  normal  0.370827  normal  0.408785 
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  43.05 
 
 
167 aa  129  1.0000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_002947  PP_5271  leucine-responsive regulatory protein  42.68 
 
 
162 aa  129  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2201  AsnC family transcriptional regulator  46.45 
 
 
156 aa  129  2.0000000000000002e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.0411716  normal  0.420331 
 
 
-
 
NC_010524  Lcho_1629  AsnC family transcriptional regulator  44.23 
 
 
159 aa  129  2.0000000000000002e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00470119 
 
 
-
 
NC_009512  Pput_5181  AsnC family transcriptional regulator  42.68 
 
 
162 aa  129  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.73265  normal  0.0995684 
 
 
-
 
NC_008786  Veis_4443  AsnC family transcriptional regulator  45.16 
 
 
157 aa  128  4.0000000000000003e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.270446 
 
 
-
 
NC_008752  Aave_3320  AsnC family transcriptional regulator  44.59 
 
 
170 aa  127  5.0000000000000004e-29  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.0097323  normal 
 
 
-
 
NC_007511  Bcep18194_B2859  AsnC family transcriptional regulator  46 
 
 
166 aa  127  6e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
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