| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1629 |
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| Symbol | |
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| ID | 6160961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1731849 |
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| End bp | 1732328 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664383 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001790661 |
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| Protein GI | 171058312 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00470119 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTTCAG ACAACGACGC TCCCGTCATC GACAAGATCG ACCGCAAGAT CCTGCGCCAG
CTGCAGGCCG ACGGGCGCAT CTCGAACCTC AAGCTGGCCG AGGCGGTGCA CCTGTCGCCC
ACCGCCGTGC TCGAGCGGGT GCGCCGCCTC ACGCGCGACG GCTTCGTGCT GGGCTACGAG
GCGCGCCTCA ATCCCAAGCT GCTGGGTGCC GGGCTGATGG TGTTCGTGGA GGTGCTGCTC
GACCGCACCG TGCACGACGT GATGGACACC TTCAAGGCGG CCGTGCAGGT GCGCCCGGAG
ATCCTCGAGT GCCACCTCGT GGCGGGCGGT TTCGACTACC TGCTCAAGAC CCGCGTGGCC
GACATGGCGG CCTACCGCGA GTTCATCGGC ACCGTGATCT GGACCCTGCC GGGCGTGCGC
GAGACACGCA CCTACGTGGT GATGGAAGAG GTCAAGTGCA CGGCGGCGAT CGCCTTGTGA
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| Protein sequence | MVSDNDAPVI DKIDRKILRQ LQADGRISNL KLAEAVHLSP TAVLERVRRL TRDGFVLGYE
ARLNPKLLGA GLMVFVEVLL DRTVHDVMDT FKAAVQVRPE ILECHLVAGG FDYLLKTRVA
DMAAYREFIG TVIWTLPGVR ETRTYVVMEE VKCTAAIAL
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