Gene Pden_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2266 
Symbol 
ID4579320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2267048 
End bp2267509 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID639769596 
ProductAsnC family transcriptional regulator 
Protein accessionYP_916054 
Protein GI119384998 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.400993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.321257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC TTGACGCGAC GGATCGCCGC ATTCTCTCCG TCCTGCAACG CGACGGGCGC 
ATGACCAATG CCGATCTTGC CAACGAGGCC GGGCTGTCCC CCAGCGCCTG CCACCGCCGC
GTGCAGCGCC TGGAAGAAGC GGGGGTGATC CGCGGCTATG TCGCGCTGCT CGACGCGCGC
AAGCTGGAGC GTCCCACCAC GGTCTTCGTC GAGATCACGC TTTCGGGCCA GGCCGACGAG
TTGCTGGAGG CGTTCGAGCG TGCGGTGCGC ACCATCCCCG ATGTGCTGGA ATGCCACCTG
ATGGCCGGAT CGGCGGATTA CCTGCTGAAG GTGGTGGCCC AGGATACCGA CGATTTCGCC
CGCATCCACC GTCAGCGACT GGCGAAGCTG CCGGGCGTCC AGCAGATGCA TTCGTCCTTT
TCGCTGCGCA CGGTAGCCTT TACCACCGCC CTGCCGGTCT AA
 
Protein sequence
MIELDATDRR ILSVLQRDGR MTNADLANEA GLSPSACHRR VQRLEEAGVI RGYVALLDAR 
KLERPTTVFV EITLSGQADE LLEAFERAVR TIPDVLECHL MAGSADYLLK VVAQDTDDFA
RIHRQRLAKL PGVQQMHSSF SLRTVAFTTA LPV