36 homologs were found in PanDaTox collection
for query gene Nther_1269 on replicon NC_010718
Organism: Natranaerobius thermophilus JW/NM-WN-LF



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  100 
 
 		 151 aa  307  4e-83  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
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NC_011661  Dtur_1301  positive regulator of sigma E, RseC/MucC  35.82 
 
 		 136 aa  88.2  3e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_011899  Hore_13330  positive regulator of sigma E, RseC/MucC  33.57 
 
 		 143 aa  67.8  0.00000000004  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00188105  n/a   
 
 
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NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  28.86 
 
 		 157 aa  67.4  0.00000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
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NC_010320  Teth514_2252  positive regulator of sigma E, RseC/MucC  33.82 
 
 		 146 aa  65.5  0.0000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0077769  n/a   
 
 
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NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  28.28 
 
 		 149 aa  63.5  0.0000000009  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
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NC_007498  Pcar_1825  positive regulator of sigma E activity  29.45 
 
 		 156 aa  62  0.000000002  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  0.00000000801133  n/a   
 
 
-
 
NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  26.24 
 
 		 152 aa  62.4  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
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NC_008345  Sfri_2932  positive regulator of sigma E, RseC/MucC  30.33 
 
 		 168 aa  60.5  0.000000008  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00401591  n/a   
 
 
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NC_002977  MCA1468  sigma factor regulator MucC  34.41 
 
 		 146 aa  59.3  0.00000002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_1101  positive regulator of sigma E, RseC/MucC  30.14 
 
 		 155 aa  53.1  0.000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.138854 
 
 
-
 
NC_013223  Dret_1803  positive regulator of sigma E, RseC/MucC  23.08 
 
 		 151 aa  51.6  0.000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_1345  sigma-E factor regulatory protein RseC  30.97 
 
 		 157 aa  51.6  0.000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1156  positive regulator of sigma E, RseC/MucC  31.78 
 
 		 157 aa  50.8  0.000006  Shewanella putrefaciens CN-32  Bacteria  normal  0.0373343  n/a   
 
 
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NC_008576  Mmc1_1772  positive regulator of sigma(E), RseC/MucC  33.33 
 
 		 159 aa  50.8  0.000006  Magnetococcus sp. MC-1  Bacteria  unclonable  0.0000000000338989  hitchhiker  0.000593819 
 
 
-
 
NC_010483  TRQ2_1473  positive regulator of sigma E, RseC/MucC  31.65 
 
 		 126 aa  50.4  0.000007  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1427  positive regulator of sigma E, RseC/MucC  31.2 
 
 		 115 aa  50.1  0.00001  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013171  Apre_0914  positive regulator of sigma E, RseC/MucC  24.81 
 
 		 138 aa  49.3  0.00002  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1275  positive regulator of sigma E, RseC/MucC  25.18 
 
 		 157 aa  48.5  0.00003  Shewanella baltica OS195  Bacteria  normal  0.0820222  normal  1 
 
 
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NC_009665  Shew185_1242  positive regulator of sigma E, RseC/MucC  25.18 
 
 		 157 aa  48.5  0.00003  Shewanella baltica OS185  Bacteria  hitchhiker  0.000737615  n/a   
 
 
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NC_011663  Sbal223_3115  positive regulator of sigma E, RseC/MucC  25.18 
 
 		 157 aa  48.5  0.00003  Shewanella baltica OS223  Bacteria  normal  0.0121324  normal  0.0261972 
 
 
-
 
NC_009052  Sbal_1198  positive regulator of sigma E, RseC/MucC  25.18 
 
 		 157 aa  48.5  0.00003  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000634638  n/a   
 
 
-
 
NC_014150  Bmur_2763  putative positive regulator of sigma E, RseC/MucC  30 
 
 		 140 aa  48.1  0.00005  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0019955  n/a   
 
 
-
 
NC_007484  Noc_2463  positive regulator of sigma(E), RseC/MucC  32.91 
 
 		 146 aa  47.4  0.00008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.939617  n/a   
 
 
-
 
NC_007954  Sden_2769  positive regulator of sigma(E), RseC/MucC  26.96 
 
 		 177 aa  45.8  0.0002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000517336  n/a   
 
 
-
 
NC_009831  Ssed_1145  positive regulator of sigma E, RseC/MucC  28.76 
 
 		 151 aa  45.4  0.0003  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000000688126  normal  1 
 
 
-
 
NC_009457  VC0395_A2042  sigma-E factor regulatory protein RseC  29.52 
 
 		 156 aa  45.1  0.0003  Vibrio cholerae O395  Bacteria  normal  0.436748  n/a   
 
 
-
 
NC_008463  PA14_54400  positive regulator for alginate biosynthesis MucC  30.19 
 
 		 151 aa  45.4  0.0003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.675062  normal  1 
 
 
-
 
NC_007520  Tcr_0730  positive regulator of sigma(E), RseC/MucC  29.47 
 
 		 167 aa  45.1  0.0003  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.0000000000000950135  n/a   
 
 
-
 
NC_008340  Mlg_1342  positive regulator of sigma E, RseC/MucC  23.13 
 
 		 147 aa  44.7  0.0004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0666262  normal  0.770202 
 
 
-
 
NC_009656  PSPA7_4754  positive regulator for alginate biosynthesis MucC  28.3 
 
 		 151 aa  43.9  0.0007  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1034  positive regulator of sigma E, RseC/MucC  25.55 
 
 		 154 aa  43.9  0.0008  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00221159  n/a   
 
 
-
 
NC_013223  Dret_0535  positive regulator of sigma E, RseC/MucC  24.32 
 
 		 125 aa  43.5  0.001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_1953  positive regulator of sigma E, RseC/MucC  31.17 
 
 		 151 aa  43.5  0.001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.13883  normal  1 
 
 
-
 
NC_009783  VIBHAR_03539  positive regulator of sigma E activity  31.08 
 
 		 156 aa  42.7  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_1580  positive regulator of sigma E, RseC/MucC  28.97 
 
 		 151 aa  40.4  0.009  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
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