Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0535 |
Symbol | |
ID | 8418343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 644412 |
End bp | 644789 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037099 |
Product | positive regulator of sigma E, RseC/MucC |
Protein accession | YP_003197410 |
Protein GI | 258404668 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTGCA CTTGCAACCC CGTCGGCACG CAGAAAATGG CCTTTTCCGC CCATGATGCC TTCCAGGCCC AGGTCGGCGA TGAGGTCGAC GTGGCCTTTG AAGCAACGGG CCGCAAACTG GCCATGGCCG TTTTATATGG CGTTCCGCTT CTGGCATTTT TACTGGGCGC GATTATCGGC AATGAGTTGG CGCTTTTTGG CAGCGCTGAC CTTTCAGGAG TGGTTTTAAG CCTTACCGCA ACCTTGGCGG CCTTTATCGG GATCCGGTGG TACAGCAGAA ATCGCCTCGA ATCTGACGCG GAGTATCGGC CGGTGGTTAT CGAGCGATAT CCAAGCCCCC CAAAAACCAC GGAAGACGAG GCGCCCATCG CGTCCTGA
|
Protein sequence | MRCTCNPVGT QKMAFSAHDA FQAQVGDEVD VAFEATGRKL AMAVLYGVPL LAFLLGAIIG NELALFGSAD LSGVVLSLTA TLAAFIGIRW YSRNRLESDA EYRPVVIERY PSPPKTTEDE APIAS
|
| |