Gene Dret_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0535 
Symbol 
ID8418343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp644412 
End bp644789 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content58% 
IMG OID645037099 
Productpositive regulator of sigma E, RseC/MucC 
Protein accessionYP_003197410 
Protein GI258404668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGCA CTTGCAACCC CGTCGGCACG CAGAAAATGG CCTTTTCCGC CCATGATGCC 
TTCCAGGCCC AGGTCGGCGA TGAGGTCGAC GTGGCCTTTG AAGCAACGGG CCGCAAACTG
GCCATGGCCG TTTTATATGG CGTTCCGCTT CTGGCATTTT TACTGGGCGC GATTATCGGC
AATGAGTTGG CGCTTTTTGG CAGCGCTGAC CTTTCAGGAG TGGTTTTAAG CCTTACCGCA
ACCTTGGCGG CCTTTATCGG GATCCGGTGG TACAGCAGAA ATCGCCTCGA ATCTGACGCG
GAGTATCGGC CGGTGGTTAT CGAGCGATAT CCAAGCCCCC CAAAAACCAC GGAAGACGAG
GCGCCCATCG CGTCCTGA
 
Protein sequence
MRCTCNPVGT QKMAFSAHDA FQAQVGDEVD VAFEATGRKL AMAVLYGVPL LAFLLGAIIG 
NELALFGSAD LSGVVLSLTA TLAAFIGIRW YSRNRLESDA EYRPVVIERY PSPPKTTEDE
APIAS