16 homologs were found in PanDaTox collection
for query gene Dret_1803 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013223  Dret_1803  positive regulator of sigma E, RseC/MucC  100 
 
 		 151 aa  301  2.0000000000000002e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  29.45 
 
 		 152 aa  55.5  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1772  positive regulator of sigma(E), RseC/MucC  39.77 
 
 		 159 aa  54.3  0.0000005  Magnetococcus sp. MC-1  Bacteria  unclonable  0.0000000000338989  hitchhiker  0.000593819 
 
 
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NC_013223  Dret_0535  positive regulator of sigma E, RseC/MucC  35.79 
 
 		 125 aa  52.8  0.000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  22.92 
 
 		 151 aa  52  0.000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
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NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  33.85 
 
 		 157 aa  50.4  0.000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
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NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  27.21 
 
 		 149 aa  45.8  0.0002  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
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NC_011661  Dtur_1301  positive regulator of sigma E, RseC/MucC  27.78 
 
 		 136 aa  45.8  0.0002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_010320  Teth514_2252  positive regulator of sigma E, RseC/MucC  26.24 
 
 		 146 aa  44.7  0.0004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0077769  n/a   
 
 
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NC_009831  Ssed_1145  positive regulator of sigma E, RseC/MucC  27.1 
 
 		 151 aa  44.7  0.0005  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000000688126  normal  1 
 
 
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NC_011899  Hore_13330  positive regulator of sigma E, RseC/MucC  26.47 
 
 		 143 aa  44.7  0.0005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00188105  n/a   
 
 
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NC_008463  PA14_54400  positive regulator for alginate biosynthesis MucC  29.17 
 
 		 151 aa  43.9  0.0008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.675062  normal  1 
 
 
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NC_011312  VSAL_I2528  sigma-E factor regulatory protein RseC  25.93 
 
 		 161 aa  43.9  0.0009  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
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NC_009656  PSPA7_4754  positive regulator for alginate biosynthesis MucC  30.21 
 
 		 151 aa  41.2  0.005  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
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NC_008309  HS_1608  positive sigma-E factor regulatory protein  21.97 
 
 		 167 aa  40.4  0.009  Haemophilus somnus 129PT  Bacteria  normal  0.0389331  n/a   
 
 
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NC_012917  PC1_3074  SoxR reducing system protein RseC  23.36 
 
 		 150 aa  40.4  0.009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.0025103  n/a   
 
 
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