9 homologs were found in PanDaTox collection
for query gene Dret_0535 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013223  Dret_0535  positive regulator of sigma E, RseC/MucC  100 
 
 		 125 aa  257  4e-68  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_013223  Dret_1803  positive regulator of sigma E, RseC/MucC  41.86 
 
 		 151 aa  51.2  0.000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  33.33 
 
 		 157 aa  48.1  0.00004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
-
 
NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  30.43 
 
 		 152 aa  47.4  0.00007  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_3074  SoxR reducing system protein RseC  28.32 
 
 		 150 aa  45.8  0.0002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.0025103  n/a   
 
 
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NC_007298  Daro_2023  positive regulator of sigma(E), RseC/MucC  33.67 
 
 		 147 aa  44.7  0.0004  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00574884  normal  1 
 
 
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NC_007498  Pcar_1825  positive regulator of sigma E activity  29.57 
 
 		 156 aa  43.5  0.001  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  0.00000000801133  n/a   
 
 
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NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  24.32 
 
 		 151 aa  43.5  0.001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
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NC_013421  Pecwa_1201  SoxR reducing system protein RseC  26.55 
 
 		 150 aa  41.2  0.005  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.0000162902  n/a   
 
 
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