Gene PC1_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3074 
Symbol 
ID8134029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3482224 
End bp3482676 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content54% 
IMG OID644866357 
ProductSoxR reducing system protein RseC 
Protein accessionYP_003018633 
Protein GI253689443 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0025103 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAAAG AATGGGCGAC AGTCGTTTCA TGGCAGAATG GCATTGCGGA GCTGCGGTGT 
GAGCCGAGCT CGGGGTGCGG TAGCTGTAAA TCCCGCTCGT CGTGTGGAAC CGGCTTATTA 
AGCCAGCTTG GGCTTTCTGC CGAAAATACG CTGTATGTGC CTTACGAGCG GCCTTTAGAA 
GTCGGACAAA AAGTTGAATT GGGGATTTCT GAGGGGCGTC TGCTGTTTTC TGCCGCTCTG 
GTTTATTTCG TTCCGCTGGT CGGGTTGCTG ATCGGTGCGG CGATCTGTCA GACGTTATTC 
GGTACCGATC TGGCTGCCGT CATTGGCGCG TTGTTGGGCG GTGGGCTGGC GTTTATCGGC 
GTGAAGCGCT GGGCGAAACG GTTGGGTAAG AATAAACGTT ATGAGCCCGT TATCCTGCAA 
ATTGCACTGC CTGGCACGCT GTTACAAAAT TGA
 
Protein sequence
MIKEWATVVS WQNGIAELRC EPSSGCGSCK SRSSCGTGLL SQLGLSAENT LYVPYERPLE 
VGQKVELGIS EGRLLFSAAL VYFVPLVGLL IGAAICQTLF GTDLAAVIGA LLGGGLAFIG 
VKRWAKRLGK NKRYEPVILQ IALPGTLLQN