| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1608 |
|---|
| Symbol | rseC |
|---|
| ID | 4241135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1823621 |
|---|
| End bp | 1824124 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638105194 |
|---|
| Product | positive sigma-E factor regulatory protein |
|---|
| Protein accession | YP_719813 |
|---|
| Protein GI | 113461744 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3086] Positive regulator of sigma E activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0389331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGTCA ACTTCCTCTC TTTTCCGCTA AACGTATTAT TCAAGATATT CGAATTAAAT
AGGTTTTTTA TGCTAACAGA AAGAGCGATA GTCATTGCTT ATCATCAAGG AAAAGCAACA
GTGAAATGTC AAAGCAAAAA TGCTTGTAGC CAATGTACAG CAAAAAATAC TTGCGGAACT
TCCGCACTTT CTGAATTAAC CGGCAAAAGT CCGGAGCATA TCTTTATCGT TAATAGCCTG
ATACCCTTAA AAATAGGTCA AATTGTTGAG CTTGGTTTAC AAGAAAGTTC TCTGATTTCT
ACCGCACTTT TATTGTATAT TATTCCTTTA ATGACCTTGC TCAGTGCAAC ACTCATTGCA
AACCAAATTT TTAGCCAAGA ATTGTGGGGT GCAATTTTTA TCCTTTTTTG TACCGCACTT
TCTTTTGTGC TTATCCATTC ATACAGTAAA AAATGGCAAC ATAAAAAGGC CTTTCAACCC
ATTCTGTTAC GAATTATTCA ATAA
|
|---|
| Protein sequence | MSVNFLSFPL NVLFKIFELN RFFMLTERAI VIAYHQGKAT VKCQSKNACS QCTAKNTCGT
SALSELTGKS PEHIFIVNSL IPLKIGQIVE LGLQESSLIS TALLLYIIPL MTLLSATLIA
NQIFSQELWG AIFILFCTAL SFVLIHSYSK KWQHKKAFQP ILLRIIQ
|
|---|
| |