43 homologs were found in PanDaTox collection
for query gene Dole_2512 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  100 
 
 		 152 aa  311  1.9999999999999998e-84  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
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NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  29.14 
 
 		 157 aa  77.4  0.00000000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
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NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  28.85 
 
 		 149 aa  66.2  0.0000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
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NC_007498  Pcar_1825  positive regulator of sigma E activity  26.8 
 
 		 156 aa  64.3  0.0000000005  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  0.00000000801133  n/a   
 
 
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NC_010003  Pmob_1580  positive regulator of sigma E, RseC/MucC  28.67 
 
 		 151 aa  63.5  0.000000001  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
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NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  26.24 
 
 		 151 aa  62.4  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
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NC_008576  Mmc1_1772  positive regulator of sigma(E), RseC/MucC  35.23 
 
 		 159 aa  61.2  0.000000005  Magnetococcus sp. MC-1  Bacteria  unclonable  0.0000000000338989  hitchhiker  0.000593819 
 
 
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NC_011899  Hore_13330  positive regulator of sigma E, RseC/MucC  28.78 
 
 		 143 aa  57.8  0.00000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00188105  n/a   
 
 
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NC_013421  Pecwa_1201  SoxR reducing system protein RseC  26.67 
 
 		 150 aa  55.5  0.0000002  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.0000162902  n/a   
 
 
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NC_008463  PA14_54400  positive regulator for alginate biosynthesis MucC  28.03 
 
 		 151 aa  55.8  0.0000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.675062  normal  1 
 
 
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NC_012917  PC1_3074  SoxR reducing system protein RseC  26.67 
 
 		 150 aa  55.8  0.0000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.0025103  n/a   
 
 
-
 
NC_010159  YpAngola_A3607  SoxR reducing system protein RseC  25 
 
 		 151 aa  55.1  0.0000003  Yersinia pestis Angola  Bacteria  hitchhiker  0.00898672  normal  1 
 
 
-
 
NC_010465  YPK_1185  SoxR reducing system protein RseC  25 
 
 		 151 aa  55.1  0.0000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.101352  n/a   
 
 
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NC_009708  YpsIP31758_1132  SoxR reducing system protein RseC  25 
 
 		 151 aa  55.1  0.0000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0219505  n/a   
 
 
-
 
NC_007520  Tcr_0730  positive regulator of sigma(E), RseC/MucC  31.11 
 
 		 167 aa  53.9  0.0000007  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.0000000000000950135  n/a   
 
 
-
 
NC_013223  Dret_1803  positive regulator of sigma E, RseC/MucC  31.3 
 
 		 151 aa  53.9  0.0000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_4754  positive regulator for alginate biosynthesis MucC  28.66 
 
 		 151 aa  53.5  0.0000009  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2769  positive regulator of sigma(E), RseC/MucC  29.71 
 
 		 177 aa  53.1  0.000001  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000517336  n/a   
 
 
-
 
NC_011661  Dtur_1301  positive regulator of sigma E, RseC/MucC  25 
 
 		 136 aa  53.1  0.000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_002977  MCA1468  sigma factor regulator MucC  28.57 
 
 		 146 aa  53.1  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2248  positive regulator for alginate biosynthesis MucC  29.29 
 
 		 156 aa  52.4  0.000002  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00000124681  normal  0.0231164 
 
 
-
 
NC_013422  Hneap_0704  positive regulator of sigma E, RseC/MucC  31.13 
 
 		 183 aa  51.6  0.000003  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_1608  positive sigma-E factor regulatory protein  21.19 
 
 		 167 aa  51.6  0.000004  Haemophilus somnus 129PT  Bacteria  normal  0.0389331  n/a   
 
 
-
 
NC_009654  Mmwyl1_1101  positive regulator of sigma E, RseC/MucC  24 
 
 		 155 aa  51.2  0.000005  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.138854 
 
 
-
 
NC_014150  Bmur_2763  putative positive regulator of sigma E, RseC/MucC  29.03 
 
 		 140 aa  50.8  0.000006  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0019955  n/a   
 
 
-
 
NC_009832  Spro_3673  SoxR reducing system protein RseC  25.19 
 
 		 157 aa  50.8  0.000006  Serratia proteamaculans 568  Bacteria  normal  0.290268  normal  0.795656 
 
 
-
 
NC_007484  Noc_2463  positive regulator of sigma(E), RseC/MucC  33.33 
 
 		 146 aa  50.4  0.000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.939617  n/a   
 
 
-
 
NC_012880  Dd703_2788  SoxR reducing system protein RseC  30.46 
 
 		 155 aa  49.7  0.00001  Dickeya dadantii Ech703  Bacteria  hitchhiker  0.00872544  n/a   
 
 
-
 
NC_008340  Mlg_1342  positive regulator of sigma E, RseC/MucC  23.81 
 
 		 147 aa  48.9  0.00003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0666262  normal  0.770202 
 
 
-
 
NC_013171  Apre_0914  positive regulator of sigma E, RseC/MucC  25.41 
 
 		 138 aa  47.4  0.00006  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2252  positive regulator of sigma E, RseC/MucC  24.16 
 
 		 146 aa  47.4  0.00007  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0077769  n/a   
 
 
-
 
NC_013223  Dret_0535  positive regulator of sigma E, RseC/MucC  30.43 
 
 		 125 aa  47.4  0.00007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1034  positive regulator of sigma E, RseC/MucC  26.49 
 
 		 154 aa  46.6  0.0001  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00221159  n/a   
 
 
-
 
NC_013889  TK90_1953  positive regulator of sigma E, RseC/MucC  27.07 
 
 		 151 aa  46.2  0.0002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.13883  normal  1 
 
 
-
 
NC_012560  Avin_13720  Positive regulator for alginate biosynthesis MucC  26.14 
 
 		 156 aa  42.4  0.002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2932  positive regulator of sigma E, RseC/MucC  25.37 
 
 		 168 aa  42  0.003  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00401591  n/a   
 
 
-
 
NC_007298  Daro_2023  positive regulator of sigma(E), RseC/MucC  25.36 
 
 		 147 aa  41.2  0.005  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00574884  normal  1 
 
 
-
 
NC_009665  Shew185_1242  positive regulator of sigma E, RseC/MucC  24.68 
 
 		 157 aa  40.8  0.007  Shewanella baltica OS185  Bacteria  hitchhiker  0.000737615  n/a   
 
 
-
 
NC_011663  Sbal223_3115  positive regulator of sigma E, RseC/MucC  24.68 
 
 		 157 aa  40.8  0.007  Shewanella baltica OS223  Bacteria  normal  0.0121324  normal  0.0261972 
 
 
-
 
NC_011138  MADE_03001  sigma-E factor regulatory protein RseC  24.16 
 
 		 148 aa  40.8  0.007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0118803  n/a   
 
 
-
 
NC_009997  Sbal195_1275  positive regulator of sigma E, RseC/MucC  24.68 
 
 		 157 aa  40.8  0.007  Shewanella baltica OS195  Bacteria  normal  0.0820222  normal  1 
 
 
-
 
NC_009052  Sbal_1198  positive regulator of sigma E, RseC/MucC  24.68 
 
 		 157 aa  40.4  0.009  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000634638  n/a   
 
 
-
 
NC_009616  Tmel_0249  positive regulator of sigma E, RseC/MucC  26.56 
 
 		 132 aa  40  0.01  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
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