43 homologs were found in PanDaTox collection
for query gene Hore_13330 on replicon NC_011899
Organism: Halothermothrix orenii H 168



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011899  Hore_13330  positive regulator of sigma E, RseC/MucC  100 
 
 
143 aa  285  2e-76  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00188105  n/a   
 
 
-
 
NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  33.57 
 
 
151 aa  67.8  0.00000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  28.08 
 
 
149 aa  65.5  0.0000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
-
 
NC_011661  Dtur_1301  positive regulator of sigma E, RseC/MucC  32.39 
 
 
136 aa  61.6  0.000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  28.78 
 
 
152 aa  57.8  0.00000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2252  positive regulator of sigma E, RseC/MucC  26.57 
 
 
146 aa  57  0.00000008  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0077769  n/a   
 
 
-
 
NC_009654  Mmwyl1_1101  positive regulator of sigma E, RseC/MucC  28.77 
 
 
155 aa  53.5  0.000001  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.138854 
 
 
-
 
NC_008309  HS_1608  positive sigma-E factor regulatory protein  26.17 
 
 
167 aa  52.4  0.000002  Haemophilus somnus 129PT  Bacteria  normal  0.0389331  n/a   
 
 
-
 
NC_008576  Mmc1_1772  positive regulator of sigma(E), RseC/MucC  33.01 
 
 
159 aa  50.4  0.000008  Magnetococcus sp. MC-1  Bacteria  unclonable  0.0000000000338989  hitchhiker  0.000593819 
 
 
-
 
NC_008345  Sfri_2932  positive regulator of sigma E, RseC/MucC  26.61 
 
 
168 aa  47.8  0.00006  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00401591  n/a   
 
 
-
 
NC_007520  Tcr_0730  positive regulator of sigma(E), RseC/MucC  29.25 
 
 
167 aa  46.6  0.0001  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.0000000000000950135  n/a   
 
 
-
 
NC_009831  Ssed_1145  positive regulator of sigma E, RseC/MucC  29.27 
 
 
151 aa  47  0.0001  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000000688126  normal 
 
 
-
 
NC_007498  Pcar_1825  positive regulator of sigma E activity  25 
 
 
156 aa  46.2  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  0.00000000801133  n/a   
 
 
-
 
NC_010159  YpAngola_A3607  SoxR reducing system protein RseC  25.85 
 
 
151 aa  45.4  0.0003  Yersinia pestis Angola  Bacteria  hitchhiker  0.00898672  normal 
 
 
-
 
NC_010465  YPK_1185  SoxR reducing system protein RseC  25.85 
 
 
151 aa  45.4  0.0003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.101352  n/a   
 
 
-
 
NC_009708  YpsIP31758_1132  SoxR reducing system protein RseC  25.85 
 
 
151 aa  45.4  0.0003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0219505  n/a   
 
 
-
 
NC_013223  Dret_1803  positive regulator of sigma E, RseC/MucC  26.47 
 
 
151 aa  44.7  0.0004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  26.95 
 
 
157 aa  45.1  0.0004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
-
 
NC_009052  Sbal_1198  positive regulator of sigma E, RseC/MucC  26.36 
 
 
157 aa  44.3  0.0006  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000634638  n/a   
 
 
-
 
NC_009832  Spro_3673  SoxR reducing system protein RseC  21.62 
 
 
157 aa  43.9  0.0007  Serratia proteamaculans 568  Bacteria  normal  0.290268  normal  0.795656 
 
 
-
 
NC_009665  Shew185_1242  positive regulator of sigma E, RseC/MucC  26.85 
 
 
157 aa  43.5  0.0009  Shewanella baltica OS185  Bacteria  hitchhiker  0.000737615  n/a   
 
 
-
 
NC_009997  Sbal195_1275  positive regulator of sigma E, RseC/MucC  26.85 
 
 
157 aa  43.5  0.0009  Shewanella baltica OS195  Bacteria  normal  0.0820222  normal 
 
 
-
 
NC_011663  Sbal223_3115  positive regulator of sigma E, RseC/MucC  26.85 
 
 
157 aa  43.5  0.0009  Shewanella baltica OS223  Bacteria  normal  0.0121324  normal  0.0261972 
 
 
-
 
NC_012917  PC1_3074  SoxR reducing system protein RseC  23.81 
 
 
150 aa  43.1  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.0025103  n/a   
 
 
-
 
NC_007298  Daro_2023  positive regulator of sigma(E), RseC/MucC  23.39 
 
 
147 aa  42.4  0.002  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00574884  normal 
 
 
-
 
NC_012880  Dd703_2788  SoxR reducing system protein RseC  24.16 
 
 
155 aa  42  0.003  Dickeya dadantii Ech703  Bacteria  hitchhiker  0.00872544  n/a   
 
 
-
 
NC_008463  PA14_54400  positive regulator for alginate biosynthesis MucC  28.57 
 
 
151 aa  42  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.675062  normal 
 
 
-
 
NC_011059  Paes_1308  positive regulator of sigma E, RseC/MucC  26.8 
 
 
131 aa  41.6  0.003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.417776  normal 
 
 
-
 
NC_009901  Spea_1034  positive regulator of sigma E, RseC/MucC  26.4 
 
 
154 aa  41.6  0.004  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00221159  n/a   
 
 
-
 
NC_010498  EcSMS35_2723  SoxR reducing system protein RseC  23.78 
 
 
159 aa  41.6  0.004  Escherichia coli SMS-3-5  Bacteria  normal  0.149775  normal 
 
 
-
 
NC_009092  Shew_1051  positive regulator of sigma E, RseC/MucC  29.29 
 
 
158 aa  41.2  0.005  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000179706  normal 
 
 
-
 
NC_011138  MADE_03001  sigma-E factor regulatory protein RseC  27.17 
 
 
148 aa  40.8  0.006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0118803  n/a   
 
 
-
 
NC_013421  Pecwa_1201  SoxR reducing system protein RseC  22.3 
 
 
150 aa  40.8  0.007  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.0000162902  n/a   
 
 
-
 
NC_010468  EcolC_1107  SoxR reducing system protein RseC  23.78 
 
 
159 aa  40.8  0.007  Escherichia coli ATCC 8739  Bacteria  normal  0.288168  normal 
 
 
-
 
NC_009800  EcHS_A2725  SoxR reducing system protein RseC  23.78 
 
 
159 aa  40.8  0.007  Escherichia coli HS  Bacteria  normal  0.334856  n/a   
 
 
-
 
CP001637  EcDH1_1098  positive regulator of sigma E, RseC/MucC  23.78 
 
 
159 aa  40.8  0.007  Escherichia coli DH1  Bacteria  decreased coverage  0.00219404  n/a   
 
 
-
 
NC_008709  Ping_0068  sigma-E factor regulatory protein RseC  32.67 
 
 
149 aa  40  0.009  Psychromonas ingrahamii 37  Bacteria  decreased coverage  0.00000126596  normal  0.71927 
 
 
-
 
NC_007912  Sde_2248  positive regulator for alginate biosynthesis MucC  28.57 
 
 
156 aa  40.4  0.009  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00000124681  normal  0.0231164 
 
 
-
 
NC_011353  ECH74115_3807  SoxR reducing system protein RseC  23.08 
 
 
159 aa  40  0.01  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0524065  normal 
 
 
-
 
NC_010658  SbBS512_E2935  SoxR reducing system protein RseC  23.08 
 
 
159 aa  40  0.01  Shigella boydii CDC 3083-94  Bacteria  normal  0.151183  n/a   
 
 
-
 
NC_009801  EcE24377A_2856  SoxR reducing system protein RseC  23.08 
 
 
159 aa  40  0.01  Escherichia coli E24377A  Bacteria  normal  0.0186933  n/a   
 
 
-
 
NC_012892  B21_02428  hypothetical protein  23.08 
 
 
159 aa  40  0.01  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02464  RseC protein involved in reduction of the SoxR iron-sulfur cluster  23.08 
 
 
159 aa  40  0.01  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
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