| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2769 |
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| Symbol | |
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| ID | 4019288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3311576 |
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| End bp | 3312109 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956815 |
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| Product | positive regulator of sigma(E), RseC/MucC |
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| Protein accession | YP_563771 |
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| Protein GI | 91794120 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000517336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGGCG CTATAGAAAA ACAAGCCACA CAGGATGCGG ACAACTTACT CGAAGAAGTT
GGCCGTATTG TCGCCTATGA CGCTAAGGGC TGGGTTCGAG TCGAAGTCGA GCTAAAGAGC
GCCTGTAATC ATTGTAGTAA TAGTGATAAT TGCGGTACGT CTGCTGTGGC TAAAGCGTTT
TCAGTGAAAA CTCAGCAGTT TTCTTTACCT TGTGAGACTC AATATCCCAT AGGCGACTTG
GTTAAATTAG GCTTGCCAGC CAGCGTATTA TTAAAAGCGG CGGCCTTAGT GTATCTGTTG
CCACTTATTG GGTTATTTGT TGGCGCCTTG ATTGGCCAAG TCTTAGGTCA AAACCTATTG
AGTGTAGACA GTGACTTGCC TGCAATCACC TTAGGTGTGG CAGGGGCTTT TTCAGCTTGG
CTGTTAGGCA AACGTTTTGC TCATCAATTA GAGCAAGGTG CTCAACCTGT CATTATGGCT
CATTTAGGCC GTGAAATTGG CCTGAATGTC AGCACCGAAA TGAGTCATAA GTAA
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| Protein sequence | MSGAIEKQAT QDADNLLEEV GRIVAYDAKG WVRVEVELKS ACNHCSNSDN CGTSAVAKAF
SVKTQQFSLP CETQYPIGDL VKLGLPASVL LKAAALVYLL PLIGLFVGAL IGQVLGQNLL
SVDSDLPAIT LGVAGAFSAW LLGKRFAHQL EQGAQPVIMA HLGREIGLNV STEMSHK
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