| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2042 |
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| Symbol | rseC |
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| ID | 5137641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2200281 |
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| End bp | 2200751 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533499 |
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| Product | sigma-E factor regulatory protein RseC |
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| Protein accession | YP_001217966 |
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| Protein GI | 147674010 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.436748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGACGG CATTGGCTAC GGTGACCAAA GTGGTACCCG CTCAACAAGG ATTTCAAGTG
ACGCTGAGTT GTGAACAGCA AACCAGTTGC AGCAGTTGCC AATCCTCGAA AAGCTGCGGT
ACGGGCATCG TCTCTAAAGC GTTCGGTAAC AAAACCCTAT TCTGGCGTTT ACAAACCACA
CAAGCCCTAG AAGCGGGTGA GGTGGTCGAG ATTGGTTTGC CGGAAAAGAG CGTGCTGCAG
TCGGCGGCGC TCGTCTATTT ATTACCGCTG TTTTTCATGA TGCTGGGTGC ATGGCTTGGC
GATCAATGGC TGGCCCCTAT GTTGGGTTTT GGAGAGGGGA TAGTGATCCT TACTGCACTG
CTCTTTATTG CGCTCGGTGT ATGGGTTGCC AAACATTATG CGAAAGTGCT GGAGCTACGC
TCTCAGCAGC AAGTGGTTTT GTTACGAAAA CTGGGTATCC CGGTTGCCTA A
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| Protein sequence | MMTALATVTK VVPAQQGFQV TLSCEQQTSC SSCQSSKSCG TGIVSKAFGN KTLFWRLQTT
QALEAGEVVE IGLPEKSVLQ SAALVYLLPL FFMMLGAWLG DQWLAPMLGF GEGIVILTAL
LFIALGVWVA KHYAKVLELR SQQQVVLLRK LGIPVA
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