| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2932 |
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| Symbol | |
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| ID | 4279837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3521636 |
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| End bp | 3522142 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135752 |
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| Product | positive regulator of sigma E, RseC/MucC |
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| Protein accession | YP_751610 |
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| Protein GI | 114564096 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00401591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCC ACATGTCCGA GTCATCTACA TCCACTATGA TGGAAGAAAT TGCCCGCGTG
GTTGATTATC AACAGGGCTG GGTAACCGTT GAGGTAGAAT TAAAAAGTGC ATGTAACCAT
TGTGCCAGCA GTGAGAATTG TGGCACGTCG ACGATAGCTA AAGCTTTTTC GGTTCATACA
CAACGGTTTT CATTACCGAG TGAAAAACCT TGCCATAGCG GTGATTTGCT TAAAATCGGC
TTACCTGAAA GCGTTATCAT TAAAGCGGCG GCATTAGTGT ATTTATTGCC GTTAATAGGG
TTATTTTTAT CTGCAATGAT AGGGCATATG CTGGCCGCTG GCATAGGATT AAGTACGAAT
GGTTTTGCTA TGGCTTTTGG TGCATTAGGA GCATTGGTTG CTTGGTTTAT TGGTAAACAC
TTTGCCACTG AACTTGAGGC TCACGCCACA CCAGTGATCA TTGCCTATTT AGGCCAAGAA
GTGGGCATTA TTAGTGCGAG TCATTAG
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| Protein sequence | MKSHMSESST STMMEEIARV VDYQQGWVTV EVELKSACNH CASSENCGTS TIAKAFSVHT
QRFSLPSEKP CHSGDLLKIG LPESVIIKAA ALVYLLPLIG LFLSAMIGHM LAAGIGLSTN
GFAMAFGALG ALVAWFIGKH FATELEAHAT PVIIAYLGQE VGIISASH
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