Gene Apre_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0914 
Symbol 
ID8397700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp984750 
End bp985166 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content32% 
IMG OID644995261 
Productpositive regulator of sigma E, RseC/MucC 
Protein accessionYP_003152663 
Protein GI257066407 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAG TTAGAAAAGA AGGAATAGTG ATCGATAATA ACAAAGGCAA TCTAAAAGTA 
CAGATTTTTA GAAATGGGGC CTGTGGAGCA TGTGCTGCCA AAGGCTCTTG TGCTGAGAAG
AAAACTACAG AAATTGAACT TTTCTCATAT GAAGATTTAA AAAGAGGCGA TCATGTAATT
ATTGAAGGAT CTTCAAGTGA AGTAAGCAAA TTAACAGCTA CTGTCTATAT TGTCCCAGTA
GTTATGATGT TGGTGGGAGC TCTTATTCCT AATATATTTC TAAAAAACAC ATCTATGGAT
ATTAACCTAT TGACTTTAAT ATCAGTAGCA ATATTTTTCG CTATATCAAT TATTTTTATG
AAGAAACTAG ATAAAAATGT AAAGAATAGA AATATGATGA GAGTGAGAAA GGCATAA
 
Protein sequence
MDTVRKEGIV IDNNKGNLKV QIFRNGACGA CAAKGSCAEK KTTEIELFSY EDLKRGDHVI 
IEGSSSEVSK LTATVYIVPV VMMLVGALIP NIFLKNTSMD INLLTLISVA IFFAISIIFM
KKLDKNVKNR NMMRVRKA