89 homologs were found in PanDaTox collection
for query gene Mpe_A2516 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008825  Mpe_A2516  vinylacetyl-CoA delta-isomerase  100 
 
 		 542 aa  1120    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009379  Pnuc_0370  vinylacetyl-CoA Delta-isomerase  78.6 
 
 		 529 aa  881    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2993  vinylacetyl-CoA Delta-isomerase  82.75 
 
 		 545 aa  928    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007517  Gmet_2215  vinylacetyl-CoA delta-isomerase / 4-hydroxybutyryl-CoA dehydratase  37.32 
 
 		 483 aa  324  3e-87  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00499139  normal  0.0299005 
 
 
-
 
NC_002950  PG0692  4-hydroxybutyryl-CoA dehydratase  36.88 
 
 		 486 aa  302  8.000000000000001e-81  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.000000054503 
 
 
-
 
NC_009943  Dole_2592  vinylacetyl-CoA Delta-isomerase  36.89 
 
 		 484 aa  285  1.0000000000000001e-75  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.567603  n/a   
 
 
-
 
NC_010085  Nmar_0207  vinylacetyl-CoA Delta-isomerase  35.05 
 
 		 508 aa  275  1.0000000000000001e-72  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
-
 
NC_008701  Pisl_0248  vinylacetyl-CoA delta-isomerase  34.15 
 
 		 498 aa  265  1e-69  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.554864  normal  1 
 
 
-
 
NC_010525  Tneu_0422  vinylacetyl-CoA Delta-isomerase  33.74 
 
 		 497 aa  263  4e-69  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0351954  normal  0.0222686 
 
 
-
 
NC_008554  Sfum_3141  4-hydroxyphenylacetate 3-hydroxylase  33.82 
 
 		 479 aa  263  6e-69  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_0550  Vinylacetyl-CoA Delta-isomerase  31.65 
 
 		 502 aa  254  3e-66  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1321  vinylacetyl-CoA Delta-isomerase  32.85 
 
 		 507 aa  251  2e-65  Metallosphaera sedula DSM 5348  Archaea  normal  0.46835  normal  1 
 
 
-
 
NC_009073  Pcal_1396  vinylacetyl-CoA Delta-isomerase  32.63 
 
 		 503 aa  245  1.9999999999999999e-63  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0809413 
 
 
-
 
CP001800  Ssol_0312  Vinylacetyl-CoA Delta-isomerase  29.07 
 
 		 463 aa  215  1.9999999999999998e-54  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1220  vinylacetyl-CoA Delta-isomerase  32.14 
 
 		 459 aa  213  9e-54  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_3932  4-hydroxyphenylacetate 3-hydroxylase  30.6 
 
 		 487 aa  204  5e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.518981 
 
 
-
 
NC_013510  Tcur_0955  Vinylacetyl-CoA Delta-isomerase  31.37 
 
 		 458 aa  178  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_3024  4-hydroxyphenylacetate 3-hydroxylase  25.92 
 
 		 504 aa  130  6e-29  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_2574  4-hydroxyphenylacetate 3-hydroxylase  26.02 
 
 		 484 aa  129  2.0000000000000002e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1857  4-hydroxyphenylacetate 3-hydroxylase  26.75 
 
 		 483 aa  125  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.13236  n/a   
 
 
-
 
NC_007336  Reut_C6314  4-hydroxyphenylacetate 3-hydroxylase  26.01 
 
 		 513 aa  122  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.019337  n/a   
 
 
-
 
NC_013946  Mrub_1332  4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit  24.74 
 
 		 485 aa  118  3e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.198553  normal  0.0483245 
 
 
-
 
NC_003910  CPS_2047  4-hydroxyphenylacetate-3-hydroxylase family protein  22.99 
 
 		 509 aa  117  6.9999999999999995e-25  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3113  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  23.2 
 
 		 492 aa  115  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_2465  4-hydroxyphenylacetate 3-hydroxylase  24.21 
 
 		 520 aa  111  4.0000000000000004e-23  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_11000  4-hydroxyphenylacetate 3-monooxygenase large chain  24.56 
 
 		 520 aa  111  4.0000000000000004e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0339  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  23.73 
 
 		 483 aa  110  5e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_2098  4-hydroxyphenylacetate 3-hydroxylase  25.15 
 
 		 525 aa  109  1e-22  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0285855 
 
 
-
 
NC_012669  Bcav_0870  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  25.56 
 
 		 485 aa  107  4e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.15075 
 
 
-
 
NC_010515  Bcenmc03_3821  4-hydroxyphenylacetate 3-hydroxylase  24.18 
 
 		 492 aa  107  5e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.535753 
 
 
-
 
NC_003909  BCE_2148  4-hydroxyphenylacetate-3-hydroxylase  26.37 
 
 		 490 aa  106  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  0.924964  n/a   
 
 
-
 
NC_007511  Bcep18194_B2410  4-hydroxyphenylacetate 3-hydroxylase  23.98 
 
 		 492 aa  106  1e-21  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0377  4-hydroxyphenylacetate 3-hydroxylase  23.24 
 
 		 494 aa  105  2e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  0.566027  normal  1 
 
 
-
 
NC_014212  Mesil_2312  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  23.85 
 
 		 485 aa  105  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_4663  4-hydroxyphenylacetate 3-hydroxylase  23.98 
 
 		 492 aa  105  2e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.948321  n/a   
 
 
-
 
NC_008543  Bcen2424_3700  4-hydroxyphenylacetate 3-hydroxylase  23.98 
 
 		 492 aa  105  2e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196277  normal  0.366613 
 
 
-
 
NC_013441  Gbro_0220  4-hydroxyphenylacetate 3-hydroxylase  23.01 
 
 		 527 aa  105  3e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4429  4-hydroxyphenylacetate 3-hydroxylase  22.54 
 
 		 520 aa  104  3e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1007  4-hydroxyphenylacetate 3-monooxygenase large chain  24.06 
 
 		 521 aa  104  3e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  0.782334  n/a   
 
 
-
 
NC_008726  Mvan_3156  4-hydroxyphenylacetate 3-hydroxylase  26.21 
 
 		 471 aa  103  5e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.662647  normal  0.113761 
 
 
-
 
NC_008010  Dgeo_2418  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.72 
 
 		 495 aa  103  5e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_0966  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  21.44 
 
 		 490 aa  100  8e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1174  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.8 
 
 		 520 aa  100  8e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.165966  normal  1 
 
 
-
 
NC_011083  SeHA_C1209  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.45 
 
 		 520 aa  100  9e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.75215  normal  1 
 
 
-
 
NC_011080  SNSL254_A1194  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.45 
 
 		 520 aa  100  9e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.955757 
 
 
-
 
NC_011094  SeSA_A1163  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.45 
 
 		 520 aa  100  9e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.152392  normal  1 
 
 
-
 
NC_011149  SeAg_B1058  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.45 
 
 		 520 aa  100  9e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_2357  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  22.2 
 
 		 520 aa  98.6  2e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A1640  4-hydroxyphenylacetate 3-monooxygenase  21.98 
 
 		 520 aa  99  2e-19  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II0231  pyoverdin chromophore biosynthetic protein PvcC  27.27 
 
 		 501 aa  97.8  4e-19  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2569  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  25.05 
 
 		 484 aa  97.8  4e-19  Arthrobacter sp. FB24  Bacteria  normal  0.488052  n/a   
 
 
-
 
NC_006349  BMAA1922  pyoverdin chromophore biosynthetic protein PvcC  26.85 
 
 		 494 aa  97.8  5e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_0937  pyoverdin chromophore biosynthetic protein PvcC  26.85 
 
 		 494 aa  97.8  5e-19  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2199  pyoverdin chromophore biosynthetic protein PvcC  26.85 
 
 		 494 aa  97.8  5e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.359231  n/a   
 
 
-
 
NC_008835  BMA10229_1223  pyoverdin chromophore biosynthetic protein PvcC  26.85 
 
 		 494 aa  97.8  5e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.345162  n/a   
 
 
-
 
NC_009075  BURPS668_A0320  chromophore biosynthetic protein PvcC  26.85 
 
 		 494 aa  97.4  6e-19  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1681  pyoverdin chromophore biosynthetic protein PvcC  26.64 
 
 		 494 aa  97.1  7e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0230  chromophore biosynthetic protein PvcC  26.64 
 
 		 494 aa  97.1  7e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4576  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.82 
 
 		 520 aa  97.1  8e-19  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3710  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  23.82 
 
 		 520 aa  97.1  8e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.47122  normal  0.996028 
 
 
-
 
NC_012892  B21_04188  hypothetical protein  23.82 
 
 		 520 aa  96.7  9e-19  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_04222  4-hydroxyphenylacetate 3-monooxygenase  23.82 
 
 		 520 aa  96.7  9e-19  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_35400  pyoverdine biosynthesis protein PvcC  26.64 
 
 		 500 aa  95.5  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0293995  normal  0.0506136 
 
 
-
 
NC_007347  Reut_A1585  4-hydroxyphenylacetate 3-hydroxylase  23.64 
 
 		 517 aa  95.1  3e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.907011  n/a   
 
 
-
 
NC_009656  PSPA7_2985  pyoverdine biosynthesis protein PvcC  25.91 
 
 		 500 aa  94.7  3e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.437005  n/a   
 
 
-
 
NC_010658  SbBS512_E4882  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  23.62 
 
 		 520 aa  94.7  4e-18  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_2770  4-hydroxyphenylacetate 3-hydroxylase  28.18 
 
 		 473 aa  94  7e-18  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2558  4-hydroxyphenylacetate 3-hydroxylase family  24.62 
 
 		 477 aa  94  7e-18  Bacillus cereus B4264  Bacteria  normal  0.332072  n/a   
 
 
-
 
NC_013739  Cwoe_4365  4-hydroxyphenylacetate 3-hydroxylase  25.7 
 
 		 495 aa  92  2e-17  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6973  4-hydroxyphenylacetate 3-monooxygenase oxygenase component  24 
 
 		 526 aa  92  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.712496  normal  0.762352 
 
 
-
 
NC_010465  YPK_2453  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  21.81 
 
 		 520 aa  92.8  2e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2569  4-hydroxyphenylacetate 3-hydroxylase  25.53 
 
 		 521 aa  92  3e-17  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011881  Achl_4573  4-hydroxyphenylacetate 3-hydroxylase  22.68 
 
 		 535 aa  91.3  4e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.961112 
 
 
-
 
NC_009440  Msed_1776  4-hydroxyphenylacetate 3-hydroxylase  21.26 
 
 		 493 aa  87.4  5e-16  Metallosphaera sedula DSM 5348  Archaea  normal  0.193392  normal  1 
 
 
-
 
NC_009767  Rcas_2414  4-hydroxyphenylacetate 3-hydroxylase  24.57 
 
 		 521 aa  87  8e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_2019  4-hydroxyphenylacetate 3-hydroxylase  24.32 
 
 		 504 aa  86.3  0.000000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2713  4-hydroxyphenylacetate 3-hydroxylase  22.61 
 
 		 516 aa  85.9  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.541372  normal  0.782649 
 
 
-
 
NC_003909  BCE_2601  4-hydroxyphenylacetate 3-hydroxylase  24.78 
 
 		 476 aa  85.1  0.000000000000003  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00159039  n/a   
 
 
-
 
NC_011831  Cagg_2030  4-hydroxyphenylacetate 3-hydroxylase  25.68 
 
 		 530 aa  84.3  0.000000000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_0634  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  21.83 
 
 		 520 aa  84  0.000000000000006  Serratia proteamaculans 568  Bacteria  normal  0.603105  normal  1 
 
 
-
 
NC_008541  Arth_1935  4-hydroxyphenylacetate 3-hydroxylase  26.96 
 
 		 538 aa  84  0.000000000000006  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1818  4-hydroxyphenylacetate 3-hydroxylase  22.73 
 
 		 535 aa  82.4  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_0996  4-hydroxyphenylacetate 3-hydroxylase  22.87 
 
 		 488 aa  80.1  0.0000000000001  Metallosphaera sedula DSM 5348  Archaea  normal  0.0222064  normal  0.012 
 
 
-
 
NC_009077  Mjls_2646  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  23.95 
 
 		 501 aa  76.6  0.000000000001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1785  4-hydroxyphenylacetate 3-hydroxylase  23.83 
 
 		 493 aa  67.8  0.0000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.197598 
 
 
-
 
NC_012912  Dd1591_0652  4-hydroxyphenylacetate 3-hydroxylase  21.61 
 
 		 505 aa  61.6  0.00000003  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_2661  4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit  24.31 
 
 		 452 aa  60.8  0.00000005  Mycobacterium sp. KMS  Bacteria  normal  0.0649598  normal  1 
 
 
-
 
NC_008146  Mmcs_2617  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component  24.31 
 
 		 452 aa  60.8  0.00000005  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  30.67 
 
 		 385 aa  43.5  0.009  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.272038 
 
 
-
 
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