Gene Ssol_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0550 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp497276 
End bp498784 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content39% 
IMG OID 
ProductVinylacetyl-CoA Delta-isomerase 
Protein accessionACX90826 
Protein GI261601223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTAA GAACTGGGGA AGAGTACGTT AATGCAATTA GGCATAGAAA TAAGGTTGAA 
ATTTACGTTA TGGGGAAGGA AGTAAAGGAT GTAACAGAGC ATCCTTTCTT AAAGCCTTCA
GTACTTGCAT TTAAAGCAAC TTATGATGCA GCCCATGAAG AGGATAGTGA ATCTTTAGCT
AGAGCATGGA GTTCCTTCAT TAATGAAGAG GTAAATAGAT TCACCCATAT CCATAGATCT
CCAGAGGATT TGGCAGCTAA GGTTAAACTT CTGAGAAAGA TCAGTCATAA AACGGGAGCG
TGTTTCCAAA GGTGTGTAGG GTGGGACGCT CTAAATGCAA TATACGTTAC CTCTAGACTA
ATGGCGGAAA GGGGTAAAAA GGAGTATTAT GAGAGATTTG TGGAATATTT GAAATATGTA
CAAAAGAATG ATGTAGCGTT AGCTGGAGCC ATGACCGATG TTAAAGGTAT AAGAACGTTG
AGACCTCATG AGCAACCTCA TGCTTATTTA AGAGTAACCC AGGTTACTAA AGACGGTATT
TACGTTTCTG GTGCTAAGGC GAATATAACT GGAATAGGAG CTGCTGAAGA AATTGTGGTT
ATGCCAACTA GAGCGATGAG TGAGAAAGAT ATGGATTTTG CGGTAGCTTT TTCTATACCA
TTAGATACTG AGGGTATTAA AGTTATAATA GGAAGGCAAG TTAATGATGG GAGAAGGTTA
GAAGAAGGGG AGATAGATGG ATTACCCTAC CGTACCAATC ATGAGGGCTT GGTAATATTT
GATAACGTCT TCGTTCCAAT GGAAAGAGTG TTTATGTTAG GGGATTGGCA GATGAGCGGA
ATCCTAGTTG AAATTTTCAG CTCTTATCAT AGGCAAGGTT ATGGAGGTTG TAAGTCGGGA
TTGGGGGATG TGATAATTGG TGCAGCATAT AATTTAGCTA AGCAAATTGG AGTCGAAAAA
GCTCCACATA TTCAGAATAA GCTAAATGAA ATGGTTTTAT TGAATGAGAA CATGTATGGA
AGTGGCATTG CTGCCAGTCT AGATGCAGTT AAGTTATGTG AAGATGGCTG CTGGTGGGTT
AATCCCATGT TTGCAAACGT TACTAAGCAA TTAGTCACGA GATTTCCTTA TGAAATTACT
AAGTTTTCAA CTGATATTGC AGGAGGTATA ATAGGTACTG CTCCAAGTGA GTGGGATTTG
AAAAACCCTA AACTTAAACC ATATATTGAG AAGTACCTAC AAGGTATGAT GGACTATAGT
ACGGAAGATA GGCTAAGAAT GGTAAGATTA TTAGAAAATG TAGGCTTTAG TGTGGCGTTT
CTAATTGAAT CGGTTCATGG AGCAGGTAGC CCAGAAGCTC AGAGAATTGC CATAAATAGG
GTCTACGACT ATGAATATGC TGAGAAGATT GCTAAATACT TGTCGCAAAT AGAGAAGAGA
ATTGACTTTA AAGAAAATGC AGAGCCTTGG AGGAAGACAG ACACGGAGAA GATAGCTAGT
AGTGGCTGA
 
Protein sequence
MVLRTGEEYV NAIRHRNKVE IYVMGKEVKD VTEHPFLKPS VLAFKATYDA AHEEDSESLA 
RAWSSFINEE VNRFTHIHRS PEDLAAKVKL LRKISHKTGA CFQRCVGWDA LNAIYVTSRL
MAERGKKEYY ERFVEYLKYV QKNDVALAGA MTDVKGIRTL RPHEQPHAYL RVTQVTKDGI
YVSGAKANIT GIGAAEEIVV MPTRAMSEKD MDFAVAFSIP LDTEGIKVII GRQVNDGRRL
EEGEIDGLPY RTNHEGLVIF DNVFVPMERV FMLGDWQMSG ILVEIFSSYH RQGYGGCKSG
LGDVIIGAAY NLAKQIGVEK APHIQNKLNE MVLLNENMYG SGIAASLDAV KLCEDGCWWV
NPMFANVTKQ LVTRFPYEIT KFSTDIAGGI IGTAPSEWDL KNPKLKPYIE KYLQGMMDYS
TEDRLRMVRL LENVGFSVAF LIESVHGAGS PEAQRIAINR VYDYEYAEKI AKYLSQIEKR
IDFKENAEPW RKTDTEKIAS SG