| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_04188 |
|---|
| Symbol | hpaB |
|---|
| ID | 8115084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 4497407 |
|---|
| End bp | 4498969 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644850328 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001901 |
|---|
| Protein GI | 251787597 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | [TIGR02310] 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG AAGATTTCCG CGCCAGTACC CAACGTCCTT TCACCGGGGA AGAGTATCTG
AAAAGCCTGC AGGATGGTCG CGAGATCTAT ATCTATGGCG AGCGAGTGAA AGACGTCACC
ACTCATCCGG CATTTCGTAA TGCGGCAGCG TCTGTTGCCC AGCTGTACGA CGCACTGCAC
AAACCGGAGA TGCAGGACTC TCTGTGTTGG AACACCGACA CCGGCAGCGG CGGCTATACC
CATAAATTCT TCCGCGTGGC GAAAAGTGCC GACGACCTGC GCCAGCAACG CGACGCCATC
GCTGAGTGGT CACGCCTGAG CTATGGCTGG ATGGGCCGTA CCCCAGACTA CAAAGCCGCT
TTCGGTTGCG CACTGGGCGC GAATCCGGGC TTTTACGGTC AGTTCGAGCA GAACGCCCGT
AACTGGTACA CCCGTATTCA GGAAACTGGC CTCTACTTTA ACCACGCGAT TGTTAACCCA
CCGATCGATC GTCATTTGCC GACCGATAAA GTGAAAGACG TTTACATCAA GCTGGAAAAA
GAGACTGACG CCGGGATTAT CGTCAGCGGT GCGAAAGTGG TTGCCACCAA CTCGGCGCTG
ACTCACTACA ACATGATTGG CTTCGGCTCG GCACAAGTGA TGGGCGAAAA CCCGGACTTC
GCACTGATGT TCGTTGCGCC AATGGATGCC GATGGCGTGA AATTAATCTC CCGCGCCTCT
TATGAGATGG TCGCGGGTGC TACCGGCTCG CCATACGACT ACCCGCTCTC CAGCCGCTTC
GATGAGAACG ATGCGATTCT GGTGATGGAT AACGTGCTGA TTCCATGGGA AAACGTGCTG
ATCTACCGCG ATTTTGATCG CTGCCGTCGC TGGACGATGG AAGGCGGTTT TGCCCGTATG
TATCCGCTGC AAGCCTGTGT GCGCCTGGCA GTGAAATTAG ACTTCATTAC GGCACTGCTG
AAAAAATCAC TCGAATGTAC CGGCACCCTG GAGTTCCGTG GTGTGCAGGC CGATCTCGGT
GAAGTGGTAG CGTGGCGCAA CACCTTCTGG GCATTGAGTG ACTCGATGTG TTCAGAAGCA
ACGCCGTGGG TCAACGGGGC TTATTTACCG GATCATGCCG CACTGCAAAC CTATCGCGTA
CTGGCACCAA TGGCCTACGC GAAGATCAAA AACATTATCG AACGCAACGT TACCAGTGGC
CTGATCTATC TCCCTTCCAG TGCCCGTGAC CTGAATAATC CGCAGATCGA CCAGTATCTG
GCGAAGTATG TGCGCGGTTC GAACGGTATG GATCACGTCC AGCGCATCAA GATCCTCAAA
CTGATGTGGG ATGCTATTGG CAGCGAATTT GGTGGTCGTC ACGAACTGTA TGAAATCAAC
TACTCCGGTA GCCAGGATGA GATTCGCCTG CAGTGTCTGC GCCAGGCACA AAACTCCGGC
AATATGGACA AGATGATGGC GATGGTTGAT CGCTGCCTGT CGGAATACGA CCAGGACGGC
TGGACTGTGC CGCACCTGCA CAACAACGAC GATATCAACA TGCTGGATAA GCTGCTGAAA
TAA
|
|---|
| Protein sequence | MKPEDFRAST QRPFTGEEYL KSLQDGREIY IYGERVKDVT THPAFRNAAA SVAQLYDALH
KPEMQDSLCW NTDTGSGGYT HKFFRVAKSA DDLRQQRDAI AEWSRLSYGW MGRTPDYKAA
FGCALGANPG FYGQFEQNAR NWYTRIQETG LYFNHAIVNP PIDRHLPTDK VKDVYIKLEK
ETDAGIIVSG AKVVATNSAL THYNMIGFGS AQVMGENPDF ALMFVAPMDA DGVKLISRAS
YEMVAGATGS PYDYPLSSRF DENDAILVMD NVLIPWENVL IYRDFDRCRR WTMEGGFARM
YPLQACVRLA VKLDFITALL KKSLECTGTL EFRGVQADLG EVVAWRNTFW ALSDSMCSEA
TPWVNGAYLP DHAALQTYRV LAPMAYAKIK NIIERNVTSG LIYLPSSARD LNNPQIDQYL
AKYVRGSNGM DHVQRIKILK LMWDAIGSEF GGRHELYEIN YSGSQDEIRL QCLRQAQNSG
NMDKMMAMVD RCLSEYDQDG WTVPHLHNND DINMLDKLLK
|
|---|
| |