| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1321 |
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| Symbol | |
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| ID | 5104572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1298117 |
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| End bp | 1299640 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507210 |
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| Product | vinylacetyl-CoA Delta-isomerase |
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| Protein accession | YP_001191403 |
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| Protein GI | 146304087 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2368] Aromatic ring hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.46835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTCA GAACAGGGGA GCAATATCTC CAATCCATAA GTAACAGGTC AAAGGTGGAG
ATTTACGTAA TGGGCAGGGA AGTCAAGGAC GTGACTAAGC ATCCCTTCCT TAAGCCTTCT
GTAATGTCCT TTAAGGCTAC ATTTGACGCT GCTTGGGAAG AGGACACAAA GGAGTTAGGC
AGGGCATGGA GTCCCTACCT AGAGGAGGAG ATAAACAGGT TTAATCATAT TCATAGATCA
CCGGATGATC TGGCTGCTAA GGTTAAGTTG CTGAGAAAGT TGAGCCATAA AACAGGGGCA
TGTTTCCAGA GATGCGTTGG TTGGGATTCC CTGAACACGC TTCACATTGT GACCACTATG
ATGGCCAAGA AGGGCAAAAC CGAGGTGAGG GATAGATTTG TGGAATATCT CAAGTACGTT
CAGAAGAATG ACCTTGCCCT TGCTGGAGCC ATGACTGACG CGAAGGGTAT TAGGAACCTT
AAACCAAGTC AGCAACCCAA CAAGAACGCT TACCTCAGGA TAACCGAGGT CACAAAGGAT
GGAATTTACG TGTCAGGTGC CAAGGCTAAC ATTACGGGAG TAGCGGCAAC AGAAGAGATG
GTCGTGCTAC CCACTAGGGC AATGGGCCCG GAGGATAAGG ATTACGCAGT TGCGTTCGCG
ATCCCGACAG ATACCGAAGG GGTCAAGATA GTCGTGGGGA GGCAACTGAA TGATGCGAGG
AGAATGGAGG AGGGTGAGAT AGACGGACTT CCCTACTTCT ACAATCACGA GGGTCTAGTG
ATCTTCGATA ACGTGTTCGT CCCCATGAAC AGGGTTTTCT TGGCAGGTGA GTGGGAGTAT
ACGGGAACCC TGGTTGAGAT ATTCTCTGCC TATCACAGGC AGGGTTATGG TGGATGTAAG
GCCGGACTCG GAGACGTGAT CATAGGGGCA AGTGCAGATC TAGCAAAGCA GATTGGAGTT
GATAGGGCGT CCCACGTTCA GGATAAGCTC ACTGAGATGA TCTTCCTTAC CGAGACCATG
TACTCAGCTG GAATCGCTGC GAGCCTTAAT GCCGTGAAAA TGTGTGATAA CTGCTGGTGG
GTTAACCCCA TGCACGCTAA TGTCACGAAA CACCTGGTTG CTAGGTTCCC ATCCCAGATT
GCACAGCTTT CCATAGACCT AGCAGGAGGA ATTGTGGGAA CAGCCCCCAG TGAATGGGAC
CTAAAGAACC CCAAACTCAA GGAGTACATA TCCAGGTACC TCCAGGGAGC TGAGGACTTC
ACGGCCGAGG ATAGGTTGAG GATGGTCAGG CTCGTGGAGA ACGTGAGCAT GGGTGTGGCT
TTCCAGATAG AGTCTGTTCA TGGAGCAGGA AGTCCCGCAG CGCAGAGAAT AATGTTCTCC
AGGTTGTATG ACCTGAACTT TGCCCAGGAA GTAGCGAAGA AGTTAGCAGG GAGAAAGAGC
GAAGTGAAGT TCACGAGTAA GGCCGAGCCC TGGAGAGAGA GTCAGTCTGA GGCAGAGGCT
AAGGAGGCCG GTCTCAAGAG TTAA
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| Protein sequence | MVVRTGEQYL QSISNRSKVE IYVMGREVKD VTKHPFLKPS VMSFKATFDA AWEEDTKELG
RAWSPYLEEE INRFNHIHRS PDDLAAKVKL LRKLSHKTGA CFQRCVGWDS LNTLHIVTTM
MAKKGKTEVR DRFVEYLKYV QKNDLALAGA MTDAKGIRNL KPSQQPNKNA YLRITEVTKD
GIYVSGAKAN ITGVAATEEM VVLPTRAMGP EDKDYAVAFA IPTDTEGVKI VVGRQLNDAR
RMEEGEIDGL PYFYNHEGLV IFDNVFVPMN RVFLAGEWEY TGTLVEIFSA YHRQGYGGCK
AGLGDVIIGA SADLAKQIGV DRASHVQDKL TEMIFLTETM YSAGIAASLN AVKMCDNCWW
VNPMHANVTK HLVARFPSQI AQLSIDLAGG IVGTAPSEWD LKNPKLKEYI SRYLQGAEDF
TAEDRLRMVR LVENVSMGVA FQIESVHGAG SPAAQRIMFS RLYDLNFAQE VAKKLAGRKS
EVKFTSKAEP WRESQSEAEA KEAGLKS
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