| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2985 |
|---|
| Symbol | pvcC |
|---|
| ID | 5356353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3074324 |
|---|
| End bp | 3075826 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812036 |
|---|
| Product | pyoverdine biosynthesis protein PvcC |
|---|
| Protein accession | YP_001348345 |
|---|
| Protein GI | 152988198 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.437005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATT CCGTCCCCAA CGCGCTGATG ACCGGCGCCG ACTATCTCGA CAGCCTGCGC
GACGGCCGCC AGGTCTACCT CAACGGCGAG CGGGTCGCCG ACGTCACCCG GCACAGGGCG
TTCCGCAATG CCTGCCGGAG CATCGCCGGG CTCTACGACG CCCTCCACGG CGAGCAGCGC
GACGTCCTCA CCCGGGTCGA TGCCCAGGGC CGCCGCAGCC ACCGCTTCTT CACCCCTGCG
CAGAACGCCG AGGACCTGCT CGGCGCGCGC GAGGCGATCG GCTGCTGGTC GCGCATGACC
TACGGCTTCA TGGGGCGTAC CCCGGACTAC AAGGCGGCGT TCATGTCCGG GCTGGAGGCC
GGCGCCGGCT TCTACGGCGA CTACCGGCAG AACGCCTGCG CCTGGCACCG CGCCTTCGCC
GACCGCGGGC TGTTCCTCAA CCATGCGATC ATCAATCCGC CGCTGGACCG CAGCAAGGCG
ATCCACGAGA TGCGCGACGT GTTCGTCCAC GTCGAACGCG AGACCGACCA GGGCATCGTC
GTCAGCGGGG CGAAGATGCT CGCCACCGGC AGTGCCATCA CCAATGCCAC CTTCGTCGCC
CCGGTGGCCT CGGCGCAGAT GGAAGCCGGC AAGGCCGAGG ACTTCGCCCT GGTGTTCTTC
GCCCGCCTGG ACAACCCCGG CCTGCGCCTG ATGTGCCGGC CATCCTACGA GGAGCGCGCG
AGCAGTCCCT TCGACTATCC GCTGTCCAGC CGCTTCGACG AGAACGACAG CGTGCTGCTG
TTCGACAAGG CGCTGATTCC CTGGGAAGAC GTCCTGGTCT ACCGCGACCT GCGCCGCGCC
ACCGGCTTCT ATGCCGAGTC GGGCTTCGCC AACCTGTACA ACTTCCAGTC CGGCATCCGC
CTCGGGGTGA AGCTGGAGCT GATGATCGGC CTGCTTTCCC TCGGCGTGCG CGCCAATGGC
ACCCAGGGCT TCCGCGGGAT CCAGGCGGCC CTCGGTGAGC TGATCGCCCT GCAGCACCTG
CTGCAGGCGC TGACCACCGC CATGGCCCGC GACCCGGAGC GCAACGCCGC CGGTTCGGCG
GTGCCGCGCC TGGAGTACGC CAATGCCCTG CGCATCCAGG TGCCGCAGAT CTGGAAGCGT
GTCCGCGAGT TGCTGGAAAA CGCCCTCGGC GGCGCCCCGC TGGTCACCGT CTCGGCCGCC
GCCGACCTGC GCGACGGCGA GGCGCGGCGG CTGGTGGACA GCTACTACCG CGGCGCCGAA
CTGGAGCCGG AGCAGCGCCT GAAGCTGTTC AAGCTGATCT GGGACGCCAC CGGCAGCGAG
TTCGGCGCGC GCCATGCGGT CTATGAGAGC CATTACTCCG GCAATGCCGA GCAGATCCGC
CTCGACTCGC TGGCCTGGGC CAACCGTCGC GGGCACCTGG CCGACTGCGA GGCGATGGTC
CGGCGCTGCA TGGCCGACTA CGACATCCAT GGCTGGCTAC GGGGGCCCTG GCAGCATGAC
TGA
|
|---|
| Protein sequence | MSHSVPNALM TGADYLDSLR DGRQVYLNGE RVADVTRHRA FRNACRSIAG LYDALHGEQR
DVLTRVDAQG RRSHRFFTPA QNAEDLLGAR EAIGCWSRMT YGFMGRTPDY KAAFMSGLEA
GAGFYGDYRQ NACAWHRAFA DRGLFLNHAI INPPLDRSKA IHEMRDVFVH VERETDQGIV
VSGAKMLATG SAITNATFVA PVASAQMEAG KAEDFALVFF ARLDNPGLRL MCRPSYEERA
SSPFDYPLSS RFDENDSVLL FDKALIPWED VLVYRDLRRA TGFYAESGFA NLYNFQSGIR
LGVKLELMIG LLSLGVRANG TQGFRGIQAA LGELIALQHL LQALTTAMAR DPERNAAGSA
VPRLEYANAL RIQVPQIWKR VRELLENALG GAPLVTVSAA ADLRDGEARR LVDSYYRGAE
LEPEQRLKLF KLIWDATGSE FGARHAVYES HYSGNAEQIR LDSLAWANRR GHLADCEAMV
RRCMADYDIH GWLRGPWQHD
|
|---|
| |