| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1396 |
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| Symbol | |
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| ID | 4909169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1309436 |
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| End bp | 1310947 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125146 |
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| Product | vinylacetyl-CoA Delta-isomerase |
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| Protein accession | YP_001056282 |
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| Protein GI | 126460004 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2368] Aromatic ring hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0809413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGG GTCTAAGGAC TGGGGATCAA TACGTGGAGG GCATAAAGAC GAGGAATAAG
GCGAAGATTT ATGTACTCGG CAAGCGCGTG CACGACGTTA CTACAAACCT GTTTCTAAAG
CCCTCCGTCC TCTCCTTCAA GGCCACCTTC GACGCTGCGT TTGAGGAAGA CACCCGCGAC
TTGGCCAGAG TATACAGCCC CTTCGCGGGG GAGGAGGTGA ACCGCTTCAA CTCCATACAC
ATGGGGCCCC AAGACTTGGT GGCCAAGGTG AAGCTGTTGA GGAAGCTCTC GCACAAGACT
GGGACGTGCT TCCAGAGGTG TGTGGGGTGG GACGCGTTAA ACACGCTCTA CATTGTCACT
AAGAAGTTGG CAGAGAAGGA GGGGAAGGGC ATCTACTACA AGAACTTCAT CAAATACCTG
GAGTACGTCC AGAGGCGGGA CTTGGCCCTT GCGGGAGCGA TGACAGACGT GAAGGGGGTT
AGGCCGCTAA AGCCCAGCGA GCAGCCTAAC CCAGACGCCT ATGTGAGAGT GGTGGAGGAG
AGAGACGACG GGATCGTGGT CAGAGGGGCT AAGGCAAACA TCACGGGGAT CGCCGTGGTG
GACGAGGTCG TCGTCATGCC CACTAGGGCG ATGACGGAGA AGGACGAGGT CTACGCCATA
TCCTTCGCCA TTCCCCTTGA CACGGAGGGG GTGACTGTGG TCGTCGGGAG GCAGTTGAAC
GATGCCAGGA GGCTTGAGGA GGGGGAGATC GACGGCTTGC CCTATATGTT CAACCACGAG
GGGCTCTTGA TACTCGAGGA CGTGTATGTG CCTTGGGACA GGGTGTTTAT GTACAGAGAG
TGGAAGTGGG CGGGGGTGCT CGTCGAGGTC TTCTCGGCCT ACCACCGCCA GGGCTATGCG
GGCTGTAAGT CCGGCCTAGG CGACGTGATC ATCGGCGCGG CGTACAACTT GGCTAAGCAG
ATCGGCGTCG CCGACAAGCC CCACGTGAGG GAGAAGCTCA CCGAGATGGT GTTTCTCAAC
GAGACTATGT ACTCCGCCGG GCTGGCGGCC AGCTGGGAGG GGAAGAAGCT TGTGGAGGGA
GACGGGGGCT GGTGGGTCAA CCCCATGTAC GCCAACGTCA CTAAGCACTT GGTCACGAGG
TTCCCCTACG AGGTGTCTAG GCTGGCTCAC GACATTGCCG GGGGTCTTTT GGGCACGGCC
CCCAGCGAGT TTGACCTTAA GAACGAGGAG GTGGGAAAGC TGGTGGCCAA GTACCTCCAG
GGGGTCCCCG AGTTCACCGC CGAGGACAGG CTCAGGATGT TGAGGCTGTT GGAGAACACC
AGCATAAGCG TGGCGTACCT AGTGGAGTCT GTCCACGGCG CCGGTAGCCC CCAGGCGCAG
AGGATATCCA TGGAGAGGAT ATACGACTTC TACACAGTGG AGAAGATAGC CAAGTCGCTG
GCGAGGATGG GCCAGAGAAA GGCAGACCCA CGGGTGGAGC CTCACAAGCC GACGGACAGC
GAAAAGGCAT GA
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| Protein sequence | MSMGLRTGDQ YVEGIKTRNK AKIYVLGKRV HDVTTNLFLK PSVLSFKATF DAAFEEDTRD
LARVYSPFAG EEVNRFNSIH MGPQDLVAKV KLLRKLSHKT GTCFQRCVGW DALNTLYIVT
KKLAEKEGKG IYYKNFIKYL EYVQRRDLAL AGAMTDVKGV RPLKPSEQPN PDAYVRVVEE
RDDGIVVRGA KANITGIAVV DEVVVMPTRA MTEKDEVYAI SFAIPLDTEG VTVVVGRQLN
DARRLEEGEI DGLPYMFNHE GLLILEDVYV PWDRVFMYRE WKWAGVLVEV FSAYHRQGYA
GCKSGLGDVI IGAAYNLAKQ IGVADKPHVR EKLTEMVFLN ETMYSAGLAA SWEGKKLVEG
DGGWWVNPMY ANVTKHLVTR FPYEVSRLAH DIAGGLLGTA PSEFDLKNEE VGKLVAKYLQ
GVPEFTAEDR LRMLRLLENT SISVAYLVES VHGAGSPQAQ RISMERIYDF YTVEKIAKSL
ARMGQRKADP RVEPHKPTDS EKA
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