| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1194 |
|---|
| Symbol | hpaB |
|---|
| ID | 6484422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1188062 |
|---|
| End bp | 1189624 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642736596 |
|---|
| Product | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| Protein accession | YP_002040354 |
|---|
| Protein GI | 194444049 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | [TIGR02310] 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.955757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTG AAGATTTTCG TACTGATAAC AAGCGTCCGT TAACGGGCGA AGAGTATTTA
AAAAGCCTGC AGGACGGGCG GGAAATTTAT ATTTACGGCG AACGCGTTAA AGATGTTACG
ACACATCCGG CATTCCGCAA TGCCGCAGCC TCTGTCGCAC AACTGTATGA CGCATTACAT
AAACCGTCGA TGCAAGATAC CCTGTGCTGG AATACCGATA CCGGCAGCGG CGGTTATACG
CATAAATTTT TCCGCGTGGC GAAAAGCGCA GACGATCTGC GCCAACAGCG TGATGCTATC
GCCGAGTGGT CACGCCTGAG TTACGGCTGG ATGGGACGCA CACCGGATTA CAAAGCCGCC
TTTGGTTGCG CCCTGGGCGC TAACCCAGCC TTCTACGGCC AGTTTGAGCA GAACGCCCGC
AACTGGTACA CCCGTATTCA GGAGACCGGC CTGTACTTTA ACCATGCAAT CGTCAACCCG
CCCATTGACC GCCACAAACC TGCCGACGAA GTGAAAGACG TCTATATCAA GCTGGAGAAA
GAGACGGACG CCGGGATTAT TGTCAGCGGG GCGAAAGTCG TCGCCACTAA CTCCGCCCTG
ACTCACTACA ACATGATTGG TTTCGGCTCA GCCCAGGTGA TGGGCGAAAA CCCGGACTTT
GCTCTGATGT TTGTCGCGCC AATGGATGCC GAAGGCGTAA AACTTATTTC GCGCGCCTCG
TATGAAATGG TCGCGGGCGC GACGGGCTCG CCGTTTGATT ATCCACTCTC CAGCCGCTTT
GATGAAAACG ATGCCATTCT GGTGATGGAC AAGGTGTTGA TCCCGTGGGA AAACGTGTTG
ATTTACCGTG ATTTCGATCG TTGCCGTCGC TGGACGATGG AAGGCGGCTT TGCCCGTATG
TATCCACTGC AAGCCTGTGT TCGTCTGGCG GTTAAACTTG ATTTCATTAC CGCGCTGCTG
AAAAAATCGC TCGAATGTAC GGGTACCGTA GAGTTCCGGG GTGTGCAGGC CGATCTCGGC
GAAGTCGTGG CCTGGCGCAA TATGTTCTGG GCATTGAGCG ATTCTATGTG TTCTGAAGCA
ACCCCGTGGG TAAACGGCGC CTGGCTGCCG GACCACGCCG CGCTGCAAAC CTATCGTGTG
ATGGCCCCAA TGGCCTACGC GAAAATTAAA AATATTATTG AACGTAACGT TACCAGCGGC
CTGATTTACC TGCCTTCCAG CGCCCGCGAT CTGAATAATC CGCAAATCGA CCAGTACCTG
GCGAAATACG TACGCGGCTC TAACGGAATG GACCATGTTG AACGTATCAA AATTCTTAAA
TTGATGTGGG ATGCCATCGG TAGCGAGTTT GGCGGTCGCC ATGAGCTGTA CGAGATTAAC
TACTCGGGCA GCCAGGATGA AATTCGTCTG CAGTGCCTGC GTCAGGCCCA GAGCTCCGGC
AATATGGATA AGATGATGGC AATGGTCGAT CGCTGCCTCT CCGAATACGA TCAGAATGGC
TGGACGGTTT CGCATTTGCA CAATAACGAC GACATCAATC AACTGGATAA GCTGCTGAAA
TAA
|
|---|
| Protein sequence | MKPEDFRTDN KRPLTGEEYL KSLQDGREIY IYGERVKDVT THPAFRNAAA SVAQLYDALH
KPSMQDTLCW NTDTGSGGYT HKFFRVAKSA DDLRQQRDAI AEWSRLSYGW MGRTPDYKAA
FGCALGANPA FYGQFEQNAR NWYTRIQETG LYFNHAIVNP PIDRHKPADE VKDVYIKLEK
ETDAGIIVSG AKVVATNSAL THYNMIGFGS AQVMGENPDF ALMFVAPMDA EGVKLISRAS
YEMVAGATGS PFDYPLSSRF DENDAILVMD KVLIPWENVL IYRDFDRCRR WTMEGGFARM
YPLQACVRLA VKLDFITALL KKSLECTGTV EFRGVQADLG EVVAWRNMFW ALSDSMCSEA
TPWVNGAWLP DHAALQTYRV MAPMAYAKIK NIIERNVTSG LIYLPSSARD LNNPQIDQYL
AKYVRGSNGM DHVERIKILK LMWDAIGSEF GGRHELYEIN YSGSQDEIRL QCLRQAQSSG
NMDKMMAMVD RCLSEYDQNG WTVSHLHNND DINQLDKLLK
|
|---|
| |