| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0230 |
|---|
| Symbol | pvcC |
|---|
| ID | 4904970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 213361 |
|---|
| End bp | 214845 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640143337 |
|---|
| Product | chromophore biosynthetic protein PvcC |
|---|
| Protein accession | YP_001074273 |
|---|
| Protein GI | 126456550 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTGA TGACGGGAAA CGACTATCTC GACAGCCTGC GTGACGGGCG CAACGTGTAT
GTCGGCGGCG AGCGGATCGC CGATGTCGCG TCGCACCGCG CGTTTCGCAA CGCGGCGCGC
AGCATCGCTT CGCTGTACGA CGCATTGCAC GGCGAGCATC GCGAGCGGCT GACCGCGCCC
GACCGGCACG GGCAGATCAC GCACCGCTTC TTCAAGCCGA GCGAATCGCC CGACGATCTG
CTTGCCGCGC AGGATGCGAT CGAGCTGTGG TCGCGGATGA CTTACGGCTT CATGGGCCGC
ACGCCCGATT ACAAGGCCGC GTTCATGTCG GGGCTCGAGG CGGGCGCCGA CTATTACGGC
GATTTCCGGC AAAACGCGGC CGGCTGGTAC AAGCGCTTCG CGGGCAGCGG CCTGTATCTG
AATCACGCGA TCATCAATCC GCCGCTCGAT CGCGGCAAGG CGATTCATGA CATGCGCGAC
GTGTTCGTGC GCGTCGTCGG CGAGACCGAT CGCGGGATCG TCGTGAGCGG CGTGAAGATG
CTCGCGACGG CGGGCGCGCT CACCAACGCG ACGTTCGTCG CGCCGGTCGC CTCGGCGCTG
CTGGAGCCCG GCAAGGCCGA CGATTTCGCG ATCGTGTTCT TCGCGCGGAT GGACAACCCG
GGGCTGAGCC TGATGTGCCG GCCGTCGTAC GAAGCGGCCG CGACGAGCCC GTTCGACGCG
CCGCTGTCGA GCCGTTTCGA CGAGAACGAC AGCGTGCTGA TCTTCGATCG CGCGCTGATT
CCATGGGAAG ACGTGCTCGT CTATCGCGAC GTGAAGCGCG CGACCGGCTT CTACGCGGCG
TCGGGTTTCG CGAATCTCTA CAACTTCCAG TCGGGCATCC GGCTCGCGGT GAAGCTCGAG
CTGATGATCG GCCTGCTGTC GCTCGGCACG CAGGCGAACG GCACGCAATC GTTCCGCGGC
ATTCAGGCGG CGCTCGGCGA GCTGGTCTCG CTCCAGCATC TGCTGAAGAC GATCACGGCC
GCGATGGCGC GCGATCCCGA GCGCACGCCG AGCGGCGTCG TCGTGCCGAA GCTTCAGTAT
GCGAGCGCGC TGCGGATCCA GGTGCCGCAG ATCTGGAAGC GCGTGCGCGA GCTGATGGAG
ACCGCGCTCG GCGGCTCGCC GCTCGTCACC GTCTCGGGCG CGGCCGATCT GCTCGATCCG
CGGGTGAAGG GCCTGATCGA CGCGTACTAC CGCGGCGCGG CGCTCGAGCC GCAGCAGCGG
ATCAAGCTCT TCAAGCTGAT CTGGGATGCG ACCGGCAGCG AGTTCGGCTC GCGTCATTCG
GTCTACGAAA CGCATTACTC CGGCAACTTC GACCAGATCC GGCTCGATTC GCTGACATGG
GCGACCCGCT CCGGCCAGCT TGCCGACTGC GAGGCGTTCG CGCGGCAGTG CATGGGCGAC
TACGACGCGT CGGGCTGGCT GCGCGGCCCC TGGCTGCACG GCTGA
|
|---|
| Protein sequence | MTLMTGNDYL DSLRDGRNVY VGGERIADVA SHRAFRNAAR SIASLYDALH GEHRERLTAP
DRHGQITHRF FKPSESPDDL LAAQDAIELW SRMTYGFMGR TPDYKAAFMS GLEAGADYYG
DFRQNAAGWY KRFAGSGLYL NHAIINPPLD RGKAIHDMRD VFVRVVGETD RGIVVSGVKM
LATAGALTNA TFVAPVASAL LEPGKADDFA IVFFARMDNP GLSLMCRPSY EAAATSPFDA
PLSSRFDEND SVLIFDRALI PWEDVLVYRD VKRATGFYAA SGFANLYNFQ SGIRLAVKLE
LMIGLLSLGT QANGTQSFRG IQAALGELVS LQHLLKTITA AMARDPERTP SGVVVPKLQY
ASALRIQVPQ IWKRVRELME TALGGSPLVT VSGAADLLDP RVKGLIDAYY RGAALEPQQR
IKLFKLIWDA TGSEFGSRHS VYETHYSGNF DQIRLDSLTW ATRSGQLADC EAFARQCMGD
YDASGWLRGP WLHG
|
|---|
| |