Gene Sfum_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3141 
Symbol 
ID4458516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3855841 
End bp3857280 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content60% 
IMG OID639703912 
Product4-hydroxyphenylacetate 3-hydroxylase 
Protein accessionYP_847249 
Protein GI116750562 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2368] Aromatic ring hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCA AAACGAAGGC GGAATATATA GAATCCTTGC GAGGCATGAA GCCGACGGTC 
TACATGTTCG GTGAGAAGAT CGAAAGCGTT GTGGACAATC CACGCCTGCG AGCGGGCATC
GAGGCGACGG GGGCGACGTA CGAACTGGCA GAGACGGAGG AGTATCGCCC TCTCATTGTG
ACTGAAAGTC CCCTCATTCA CGAACCCGTC AACCGGTATA CGTTGCCCCC GTCGTCCATC
GCGGACCTCG TCGCCAGGGT GAAGATCAAT CGTCTCATGG GCACTCGTGT CGGGACCTGC
TTTCAACGGT GCACGGGGCT GGACTGCCTG TCCGCCCTTT CCATCGTGAC CTACGACATC
GACGCCAAGC ATTCCACCCC TTACTTCAAA CGGTTCATCG AGTTTCTGAA GCATGTTCAG
AAAAACGACC TGACCTGCAA CGCCGGCGTG ACCGACGTCA AGGGCGACCG TTCCCTGGCC
CCCCACGAGC AGGAAGACAA GGACATGTAC GTGAGGGTCG TGGAACGCAA TGCGGACGGC
ATCGTCGTGA GGGGCGCCAA GGCGCACCAG ACCGGTTCCC TCTCCTCGCA CGAAATCATC
GTCCTGCCGA CGCGTGCCCT GCGAAAGGGC GACGAGGACT ACGCGCTCGC TTTTGCCATC
CCCAACGACA CTCCCGGCCT GATTCACGTC GTGGGCCGAT CGAGCCTCGA CACCCGCCAG
CTGGACGGCT GCGACCTGGG CAACCTTCAC TATTCCAAGT ACTGCCCGAC CGTGATCTTC
AAGGACGTGT TCGTTCCCTG GGAGCGGGTC TTCATGTGCG GCGAGGTGGA ATTCGCCGTG
GAGATGGTGA ACCGCTTTTC GGCTTATCAC CGCCAGAGCC ACGGCGGCTG CAAGTCGGGC
AAGATCGACT GCATGGTCGG AGCGGCCCTC ACCATGATGG ACTACAACGG GACGGAGAAG
GCCGGGCATC TCAAGCAGAA GGCCATCGAG ATGGTCCACC GGGCGGAAAC CCTCTACGGC
TGCAGCCTGG CCGCGTCCTA CGAGGGCAAA AAAGAACCTT CCGGAACCTA CTTCATCGAC
ACGGTGCTGG CCAATGCGTC CAAGATCCAC GAAGGCAAGG AAATGAGCGA GGCCGGCCGC
CTGCTGGTGG ACATCGCCGG AGGCTTCGTG GCCGATCTGC CTTCGGATCG CGACCTGGCC
ATTCCCGAAG TCGGGGAACT GCTGAAAAAA TACCTGAAGG GGGTGGCGTC GGTGCCGGTG
GAAGACCGCG TCAAAATGTA CCGGCTGATC GAAAAGCTCG TCATGGAAAG CGCCGATACG
ATTTCGGACA TCCATGGAGG CGGTTCTCCC GAGGCCCACA GGATCACGAT CCTGCGGGAA
AGCAACCTCA AGGCCAAGAA GGACGCGGCC AAGCGGTTGG CGGGAATCGA ATCGAAGTAG
 
Protein sequence
MGLKTKAEYI ESLRGMKPTV YMFGEKIESV VDNPRLRAGI EATGATYELA ETEEYRPLIV 
TESPLIHEPV NRYTLPPSSI ADLVARVKIN RLMGTRVGTC FQRCTGLDCL SALSIVTYDI
DAKHSTPYFK RFIEFLKHVQ KNDLTCNAGV TDVKGDRSLA PHEQEDKDMY VRVVERNADG
IVVRGAKAHQ TGSLSSHEII VLPTRALRKG DEDYALAFAI PNDTPGLIHV VGRSSLDTRQ
LDGCDLGNLH YSKYCPTVIF KDVFVPWERV FMCGEVEFAV EMVNRFSAYH RQSHGGCKSG
KIDCMVGAAL TMMDYNGTEK AGHLKQKAIE MVHRAETLYG CSLAASYEGK KEPSGTYFID
TVLANASKIH EGKEMSEAGR LLVDIAGGFV ADLPSDRDLA IPEVGELLKK YLKGVASVPV
EDRVKMYRLI EKLVMESADT ISDIHGGGSP EAHRITILRE SNLKAKKDAA KRLAGIESK