| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0377 |
|---|
| Symbol | |
|---|
| ID | 5421411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 391526 |
|---|
| End bp | 393010 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640879623 |
|---|
| Product | 4-hydroxyphenylacetate 3-hydroxylase |
|---|
| Protein accession | YP_001415292 |
|---|
| Protein GI | 154244334 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | [TIGR02309] 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.566027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA CCGGCAGCGC CCACATCGCC AGCCTCAGGG ACGGCCGCGA GATCTTCCTC
GACGGCCAGA AGATTTCCGA CGCCACCACC CACCCCGCCT TCCGCCGCGC GGTGGCCTCG
GTGGGGCGCA TGTTCGACTT CCACAGCGCG CCGGACAACC GCGCGCTGAT GACCTTCGAG
ACCGACACCG GCACGCTCGC CAACCGCATC TGGCAGTTGC CCACCAGCTA TGACGAGCTG
AAGACGCGCC GCCGGGGCCT TGAGGCTTGG ACCGAGCTGC ACGCCGGCTT CCTCGGCCGC
GCGCCGGACC ATGTGGCGTC CTGCATCTCC GGCATGTACA TGGGCCTCGA CCAGTTCGAG
CTGTACGATC CGGCCCGTGC CCGGGCGCTT GGCGATTACT ATCGCCATGC GCGCGACAAC
GATCTGTATC TCACCTACGT CATCATCAAC CCGCAGGCCG ACCGCTCCAA GAACGCGGCC
GAGCAGGCCG ACCCGTTCCT CTCCGCCGCC ATCGTGGACG AGGACACCTC CGGCATCACC
GTGCGCGGGG CGAAGATGCT CGCCACCGGC GGCATCATGG CCAATGAGGT GTTCGTCACC
TGCATCCAGC CGCTGCAGAA GGGCGAGGAG GCCTACGCCC TCTCCTTCGC CATTCCCATG
AACACGAAGG GCCTGAAGAT CCTGTCGCGC AAGTCCTATG AGGCAGGCGC ACCGTCGGTG
TTCGACAATC CCCTGTCGAG CCGCTTCGAC GAGAATGACG CGGTGCTGTA TTTCGACGAT
GTGAAGGTGC CGTGGGATCG GGTCTTCATC GCCGGCGACA TCGCCATGAC CGGCCGGCAG
TTCCATGCCA CCCCGGCCCA TGTCTACCAG AACTACCAGG CCCAGATCCG CCTGTCGGTA
AAGCTGAAAT TCCTGCTCGC CATCGCCCGG CGCACGGCCG AGGTGAACGG CACCACCGGC
TTCCCGCAGG TGCGCGAGAC CTTGGGCCAG CTCGCCGCCG AGGCCGCCAT GGTGGATGCC
TTCGTCGCCG CCATGGAGGC CAAGGGCAGC TTCTACGGCC CCTATTTCGT GCCCGACCGC
CACACCCTCT ACGCCGCGCA GACCCTGACC CAGCAGCTCT ACGGCAAGTT CATCACCAGC
CTGCGGGAAT TGGCCGGCGG CGGCATGATC ATGCTGCCCT CCTCGGTGCA TGACTATCAG
AACCCGGAGC TGGCCGCCCT CATCGCCAAG ACCCAGCAGT CGCCGGCTGC CAGCGCCGAA
GAAAAGGTGA AGTTCTACAA GCTCGCCTGG GACGCGGTGG GCTCGGAATT CGCCTCCCGC
CACGCCCAGT ACGAGATGTT CTATGCGGGG GCCGGCTTCG TGGTGAAGAA CCACTCCTTC
CGCACCTATG ACTGGGCCGG CGCCGAGCGC CTGCTCGACA TGATGCTTTC CTCCTATTCC
CTCGCCGACG AGGTGGCCCC GACCGCCGCC CGCGCCGCCG AGTGA
|
|---|
| Protein sequence | MIKTGSAHIA SLRDGREIFL DGQKISDATT HPAFRRAVAS VGRMFDFHSA PDNRALMTFE
TDTGTLANRI WQLPTSYDEL KTRRRGLEAW TELHAGFLGR APDHVASCIS GMYMGLDQFE
LYDPARARAL GDYYRHARDN DLYLTYVIIN PQADRSKNAA EQADPFLSAA IVDEDTSGIT
VRGAKMLATG GIMANEVFVT CIQPLQKGEE AYALSFAIPM NTKGLKILSR KSYEAGAPSV
FDNPLSSRFD ENDAVLYFDD VKVPWDRVFI AGDIAMTGRQ FHATPAHVYQ NYQAQIRLSV
KLKFLLAIAR RTAEVNGTTG FPQVRETLGQ LAAEAAMVDA FVAAMEAKGS FYGPYFVPDR
HTLYAAQTLT QQLYGKFITS LRELAGGGMI MLPSSVHDYQ NPELAALIAK TQQSPAASAE
EKVKFYKLAW DAVGSEFASR HAQYEMFYAG AGFVVKNHSF RTYDWAGAER LLDMMLSSYS
LADEVAPTAA RAAE
|
|---|
| |