Gene Daci_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3024 
Symbol 
ID5748608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3326524 
End bp3328038 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content69% 
IMG OID641298127 
Product4-hydroxyphenylacetate 3-hydroxylase 
Protein accessionYP_001564047 
Protein GI160898465 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2368] Aromatic ring hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGA CAGGCAGCCA GTACCGCGAC TCCATCCGCG ATGGCCGGCG GGTCTGGATG 
AACGGCGAGC GCGTCAAGGA TGTGACCACC CACCCCATGT TCAAGCCGCT GGTGGACATC
CGCGCGCGCA TGTACGACCT GCAGCACGAG GCCGCGCTGC GCGACGCGCT CACCTGCGAC
GAAGGCGACG GCGAGCGCCA CCCCATCGCC CACAAGCTGC CGCTGACGCG CCAGGACTGG
TGGGACAAGC GCCGCGCCAC CGACCTGCTG CTGGAGGACA TGGGCGGCGT GGTCATGCGC
GTGGGCGACG AGAGCGTGGG CGAGATGTGG TCGCTGTTCG ACGGCCAGGA CGTGCTCAAC
GAGCTGGACC CGCGCTTTTC CGCCAACATC CGCACCCACA TCCGCCGCGT GGTGCGTGGC
GACCTGTTCC ACGTATCGGC CAACACCGAC CCCAAGGGCG ACCGCTCGCG CCTGCCGCAG
GACCAGGACC CCGACGTGCT GCTGCATGTG GTCAAGGAGA CCGATGCAGG CGTCATCGTG
CGCGGCGCCA AGTACGAGAC CGCTGCCGCC TATGCCAACC AGGCCTTCAC CAAGCCGGGG
CTGGCGCACT GGGGCGACGC GGCGCAGTCC GAATACGCCA TAGGCTTCAT CTGCGACCTG
GGCGCGCCCG GCCTGCGCTT CATCTGCCGC CCGGGCCTGG CCGCCCGCGC ATCGGCCCAG
GACCATCCGT TGAGCCATCG CTTCGACGAA GTGGACGCCA TCGTGGTCTT CGACGACGTG
CTGGTTCCCT GGGAGAACGT GCTGTTCTAC CGCCACACCC GGGCCGCCCA TTTCCTGCGC
GAGACGCTGC ACCGCTACTC GGCCTTCACC TTCCTGCAGC GTAGCCTCAA GCTGGCCGAC
ATGCTGATAG GCACGGCCCT GCACAACGCG CGCCAGACCG GCGTGGAGAA GCTGCAGGCC
GTGCAGGACA GGCTGGCCGG CCTGGCCTGC TACCGCGAAG GCATCAACGC CCACCTCACG
GCCGCCATCG CACTGGCCGA GCGCAGCCCG GCCGGCCTGA TGATGCCCAA CCAGTCGCTG
CTGTTCACGG GACGGTCTCT GGCCACCAGC CAGCTGCACC ACATGATGAA CACCGTGCGC
GAGCTGTGCG GCGGCCAGGT CTGCCTGACG CCGGACCACG CCAGCTTCGA GAACGAGGAC
ACCGGCCCCT GGCTGCGCAA GTTCTACACC CTCGGCCCGC AGTGGCAGGC CGACGACCGC
CGCAAGCTGC TGGCCTATGC GCGCGACCTG CTCGACTCGG ACCACGCCGG CCACCGGCTC
AGCTTCCAGC TGTTTGCGCA ATGCCCGCCC TACGCCCAGA CGGCGGCCGT GTACCGGCAC
TTCAACTGGG ATGCGCCGCT GGACTTCGTG GGCAAGTCCG CCGGCCTGAC GGACCGCGTG
AAGGCCACGC AGGCGCCGGC CCAGGGCGAC GGTGCGGTGG CGCAATGGTT TCGCAATCAC
AACACCAGCG ACTGA
 
Protein sequence
MIRTGSQYRD SIRDGRRVWM NGERVKDVTT HPMFKPLVDI RARMYDLQHE AALRDALTCD 
EGDGERHPIA HKLPLTRQDW WDKRRATDLL LEDMGGVVMR VGDESVGEMW SLFDGQDVLN
ELDPRFSANI RTHIRRVVRG DLFHVSANTD PKGDRSRLPQ DQDPDVLLHV VKETDAGVIV
RGAKYETAAA YANQAFTKPG LAHWGDAAQS EYAIGFICDL GAPGLRFICR PGLAARASAQ
DHPLSHRFDE VDAIVVFDDV LVPWENVLFY RHTRAAHFLR ETLHRYSAFT FLQRSLKLAD
MLIGTALHNA RQTGVEKLQA VQDRLAGLAC YREGINAHLT AAIALAERSP AGLMMPNQSL
LFTGRSLATS QLHHMMNTVR ELCGGQVCLT PDHASFENED TGPWLRKFYT LGPQWQADDR
RKLLAYARDL LDSDHAGHRL SFQLFAQCPP YAQTAAVYRH FNWDAPLDFV GKSAGLTDRV
KATQAPAQGD GAVAQWFRNH NTSD