| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0692 |
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| Symbol | abfD |
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| ID | 2552648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 747632 |
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| End bp | 749092 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637149443 |
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| Product | 4-hydroxybutyryl-CoA dehydratase |
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| Protein accession | NP_904967 |
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| Protein GI | 34540488 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2368] Aromatic ring hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000054503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACTA GCGAACAGTA CGTAGAAAGT CTTCGGAAAC TTAATCTGAA GGTTTACTTC
ATGGGTGAAA GGATCGAAAA CCCTGTAGAT CATCCCATGA TTCGTCCCTC AATGAATTCA
GTAGCTATGA CTTATAAGCT TGCAGAGATG GACGAATACA AGCATTTAAT GACAGCAACT
TCAAACTTGA CTGGTAAGCA AGTGAATCGT TTCTGCCATC TACATCAGAG CACAGAGGAT
CTGAAAGACA AAGTGAAGAT GCAGCGTCTC ATGGGACAAA AAACAGCTTC ATGCTTCCAG
CGTTGTGTGG GAATGGATGC ATTCAATGCC ATCTATTCTA CTACTTACGA AATGGATCAA
GCTCTGGGTA CCACTTATCA CAAGCGTTTC ATCGAGTACA TGAAATATGT ACAAGACAAC
GACTTGGTCG TAGATGGAGC CATGACAGAC CCCAAAGGGG ATCGCGGTTT ATCTCCCTCA
GAACAAGCCG ATCCGGATCT TTATCTGCAC ATTGTTGAAG TTCGTGAAGA TGGGATCGTC
GTTTCCGGTG CAAAGGCACA CCAAACCGGA GCAGTCAATT CGCACGAGCA TCTGATCATG
CCTACGATCG CTATGCGCGA AGCTGATGCT GATTATGCCG TTTCTTTTGC TGTTCCCAGT
GATGCAGAAG GCGTTATTAT GATCTATGGT CGCCAGTCAT GCGACACTCG CAAAATGGAA
GAAGGGGCAG ACATTGACCT CGGCAACTCT GAATTCGGCG GACATGAAGC TCTTGTTGTA
TTCGACCGCG TATTCGTGCC CAATGAACGC GTGTTCATGT GCAAAGAATA CCAGTTTGCA
GGTATGATGG TAGAACGTTT CGCCGGATAC CACCGTCAGT CTTATGGAGG ATGTAAAGTA
GGTGTTGGTG ATGTACTTAT CGGTGCAGCT GCTCTTGCAG CAGACTACAA TGGAGTTCCT
AAGGCATCTC ACATTAAGGA TAAACTCATT GAGATGATCC ACCTGAATGA AACCCTTTAT
GCTTGCGGTA TTGCATGCTC TTCAGAGGGA ACTCAGATGA AAGCCGGCAA CTATATGATC
GATTTGTTGT TAGCTAATGT TTGTAAGCAA AATATCACCC GCCTTCCTTA TGAAATAGCT
CGTTTGGCAG AAGATATTGC AGGAGGTTTG ATGGTAACCA TGCCTTCTCA ACAAGACTTC
CGCCATCCGG AAATAGGCCC GATCGTAAAG AAATATCTTG CAGGTGCAAC AGGCAAATCG
ACAGAAAACC GTATGCGTGT TCTGCGTTTG ATAGAGAATA TCACGCTGGG AACAGCTGCC
GTCGGTTATC GAACCGAGTC TATGCACGGA GCCGGATCTC CTCAAGCTCA GAGAATCATG
ATCGCTCGTC AGGGAGATCT TGAGGGCAAG AAAAAGCTTG CACGGGCGAT TGCTCATATC
GACGAATCAC TCGATAAGTA A
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| Protein sequence | MMTSEQYVES LRKLNLKVYF MGERIENPVD HPMIRPSMNS VAMTYKLAEM DEYKHLMTAT
SNLTGKQVNR FCHLHQSTED LKDKVKMQRL MGQKTASCFQ RCVGMDAFNA IYSTTYEMDQ
ALGTTYHKRF IEYMKYVQDN DLVVDGAMTD PKGDRGLSPS EQADPDLYLH IVEVREDGIV
VSGAKAHQTG AVNSHEHLIM PTIAMREADA DYAVSFAVPS DAEGVIMIYG RQSCDTRKME
EGADIDLGNS EFGGHEALVV FDRVFVPNER VFMCKEYQFA GMMVERFAGY HRQSYGGCKV
GVGDVLIGAA ALAADYNGVP KASHIKDKLI EMIHLNETLY ACGIACSSEG TQMKAGNYMI
DLLLANVCKQ NITRLPYEIA RLAEDIAGGL MVTMPSQQDF RHPEIGPIVK KYLAGATGKS
TENRMRVLRL IENITLGTAA VGYRTESMHG AGSPQAQRIM IARQGDLEGK KKLARAIAHI
DESLDK
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