| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1220 |
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| Symbol | |
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| ID | 5103834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1193651 |
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| End bp | 1195030 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507112 |
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| Product | vinylacetyl-CoA Delta-isomerase |
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| Protein accession | YP_001191305 |
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| Protein GI | 146303989 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2368] Aromatic ring hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGCA AGGAGGAATT CGTGAATGGG TTAAGGGATA AGAGGAAGGT TTTCTATCGT
GGAAAGTTGA TCGATCCCAC AGAGCATCCC ATTATAAAGG TAGCCGTTTC TCACGCCTCT
AAGTTGTTTG AGTATCCTGG AAGAGTAGAC CAGGAAGGAA AAAGCAAGTT CTTTCATGTC
CCAAGGAACA GTCAAGATCT CATGGAGAGA CACGGTCTGA TATACGGGCT CACCATGTAC
TGTAACGGGA TATTTAACAT ATCCCAGGCG ATTGGTAGCG ACGCCCTTTT CGCGCTACTT
ATTACCTCGA GGAGAGTGGA CAGGGAGAGG GGAACGGACT ACACGAAAAG GGTCGAGAAC
TATCTAACCC ACGTGAGGGA TAAGGACCTT ACCATAGCGA CGGCCCAAAC GGACGTCAAG
GGGGATAGGT CCAAGAGACC AAAGGAGCAG GGGGATCCCG ACATGTACCT GAGGGTCAAG
GAGGTGAGAA GCGACGGTAT AGTGGTTAGA GGAGCAAAGG CCCACACCAC ACAGGCTGCC
GTCTCAGATG AGATAATAGT GATCCCCACG AGGGCCATGC GCGAAGAGGA AAAGGAGTAT
GCCGTGGCGT TTGCCGTGCC AGCCAACACC CAAGGGCTCA GGATGTACGT GAGACCCATA
GATGAACTGG AGGGAAACTC ATCTGCAGTC CTCTCCAGGC AGGACTATGA GCTTGAGACC
TTAACCGTTT TCGATGACGT ATTTGTGCCC TGGGATAGGG TGTTCCTATT TCAGGAGAGC
AAGTTCGCGG GTCAGCTCGC CACACTTTTC GCCACCTTCC ATAGGTTCAC AGCCCTCTCG
TACAGGGTAG CAACTGCCAA TCTCTTCCTA GGGGCAGCAA GGCTTGCGTC CTTCGTTAAC
GGAATTCAGA ACGAAAAGCA GGTCAGGGAC GACATAGTGG ACATGATAAT GTACAAGGAG
GTAATGAGGG CAACAGCCCT GTCGGCTGCC ATGTCTCCAG TGATCGAGGA AGGGGTGGCT
ATCCCGAACC CAGTCTTCAC CAACGTGGGT AAGCTCTACT CCAACGCCCA CTTCCACGAC
GTGGTCAGGG ACCTCATAGA TGTCTCGGGT GGGATAATCG CGACGATGCC CTCAGAGGAG
GACCTGACAG GGGAGGGAAG GGAGGAGATC ATGAAGTACT TGAGGGGAGC CGTGGATGGG
AAAGAAAGGA CTCAGGTGTT GAAGATTGCG AAGGAGCTTG GATCCAGTAA CTTCACGGGG
TATATTCTAA CTCTCATGAT TCACGCGGAG GGCTCAATGG AGGCCAGCAA GATAGAGTTA
TACCGAGGAT ATGACTTCTC GGACTCTGAG AAACTGGTGA AATCCCTTCT AAACCGTTAA
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| Protein sequence | MRSKEEFVNG LRDKRKVFYR GKLIDPTEHP IIKVAVSHAS KLFEYPGRVD QEGKSKFFHV
PRNSQDLMER HGLIYGLTMY CNGIFNISQA IGSDALFALL ITSRRVDRER GTDYTKRVEN
YLTHVRDKDL TIATAQTDVK GDRSKRPKEQ GDPDMYLRVK EVRSDGIVVR GAKAHTTQAA
VSDEIIVIPT RAMREEEKEY AVAFAVPANT QGLRMYVRPI DELEGNSSAV LSRQDYELET
LTVFDDVFVP WDRVFLFQES KFAGQLATLF ATFHRFTALS YRVATANLFL GAARLASFVN
GIQNEKQVRD DIVDMIMYKE VMRATALSAA MSPVIEEGVA IPNPVFTNVG KLYSNAHFHD
VVRDLIDVSG GIIATMPSEE DLTGEGREEI MKYLRGAVDG KERTQVLKIA KELGSSNFTG
YILTLMIHAE GSMEASKIEL YRGYDFSDSE KLVKSLLNR
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