| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1785 |
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| Symbol | |
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| ID | 5453908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1938415 |
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| End bp | 1939896 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877365 |
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| Product | 4-hydroxyphenylacetate 3-hydroxylase |
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| Protein accession | YP_001413060 |
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| Protein GI | 154252236 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2368] Aromatic ring hydroxylase |
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| TIGRFAM ID | [TIGR02309] 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.197598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAC GTACGGGCGC ACAGTTTTTG GAGGGCCTCA AGCAACCTCG GGAGATTTGG
GTCGGCGACC GAAAGATCGA GAGCGTCGCC GACGACCCCG CATTCGCGGG CGCGGCGCGT
GGCGTCGCAG CCGTCTATGA TCTCCAGCAT AAAGAGGCTG ACGCCTGCCT GATGCCGGAT
CCCGAGACGG GTGAAAAGAT CAATGTTAGC CATATGATTC CTCGATCGAG GCAGGATCTG
GCGCGTCGTC GCGCGGGGCT GGAAAAAATC GCCGCATATT CAGTCGGCCT GATGGGCCGC
ACGCCGGACT ATATGAATGT GACCTATGCG GGCTTCGCTG GCCGCGCCGA GGAGTGGGCC
GTAAATGGCA ACGAGGAGGG CGCGGAAAAC CTCGTCAACT ATCAGAAATA TCTGCGCCGC
AACGACATTT CGCTGACGCA TACGATCGTC AATCCGACCA TTGACAAGGC GCAGGGCGAC
GCGCCGCAAC CCGGCAACGA TGTGGCCCTT CGCAAGGTTG GCGAAACGGA GCACGGCATC
GTCGTGCGCG GTGCGCGGAT CCTCGCGACG CTCGCCCCTT TCGCCGACGA GATTGCGGTC
TATCCGTCCC ATCCCTTGCC GCCCGATTGC GACGAGTACG CGATCTCCTT CTGCATTCCG
ATGTCCACCC CTGGTCTCAA ATTCATCTGC CGGGATTCGT TTTCCGAAAG CAGCAATTTT
TTCGATCACC CCATCTCGGG CCGGTTCGAT GAGCAGGATG CCTTCGTGAT CTTCGACAAT
GTCGAAGTGC CCCGGAACCG TCTGCACGTC AACTGCAACA CCGCCGTCTA CAATTCGGTC
ATGATGCGCA GCTGGTGGCC GAACGTCATG CAGCAGACAA CGGTCCGGGC GCTGACGAAA
CTCGAATTTG CCTGGGGCCT CGCCTCGCGG ATGACCGAGG TGATCAACGA CGTCAAGCCG
CAGACATGGG AGATGCTCGG CGAAATCTGG AGCTATGCCG AATTGACCCG CGCCTGCCTG
AAAGCCGCCG AAGACGGGGC TATAGACTAT GGCAACGGCG TCTGGCTGCC GGATGCCCAA
CCCTTCGCCG CCCTTCGCGC GTCGATGCCG CGATGGATGG CGCGGGTCAG CGAAATCATC
CAACTCATCG GGTCGCATAA CGTCTTCGCC GCCCCGAGCC GCGCTCAACT CGACGATGCC
GGTCTTCGGC CGCTCATCGA CCATTATCTG CGCGGCGCTG GCGATGTGGG TGCCGAGCAG
CGCGCGCGTG TCTTCCGGCT CGCATGGGAT TTCGTCGGCA CGGGCCTTGC TGGCCGGAAC
CTCCAGTACG AGCGCTTCTA TCTCGGATCT TCGGTCCGTA ACTATCAGAT GGCCCATCTG
TTCGGTGACC GCACCCGCGC CAACGAGTTG GTCGATCGCT TTCTGACCGA GGACATTGGC
GCGATGAAAA AAGCGGACCG CCATGTCGCG GAGGCCGTGT GA
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| Protein sequence | MPARTGAQFL EGLKQPREIW VGDRKIESVA DDPAFAGAAR GVAAVYDLQH KEADACLMPD
PETGEKINVS HMIPRSRQDL ARRRAGLEKI AAYSVGLMGR TPDYMNVTYA GFAGRAEEWA
VNGNEEGAEN LVNYQKYLRR NDISLTHTIV NPTIDKAQGD APQPGNDVAL RKVGETEHGI
VVRGARILAT LAPFADEIAV YPSHPLPPDC DEYAISFCIP MSTPGLKFIC RDSFSESSNF
FDHPISGRFD EQDAFVIFDN VEVPRNRLHV NCNTAVYNSV MMRSWWPNVM QQTTVRALTK
LEFAWGLASR MTEVINDVKP QTWEMLGEIW SYAELTRACL KAAEDGAIDY GNGVWLPDAQ
PFAALRASMP RWMARVSEII QLIGSHNVFA APSRAQLDDA GLRPLIDHYL RGAGDVGAEQ
RARVFRLAWD FVGTGLAGRN LQYERFYLGS SVRNYQMAHL FGDRTRANEL VDRFLTEDIG
AMKKADRHVA EAV
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