| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4882 |
|---|
| Symbol | hpaB |
|---|
| ID | 6270268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4553905 |
|---|
| End bp | 4555467 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641728617 |
|---|
| Product | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| Protein accession | YP_001883011 |
|---|
| Protein GI | 187730067 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2368] Aromatic ring hydroxylase |
|---|
| TIGRFAM ID | [TIGR02310] 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG AAGATTTCCG CGCCAGTACC CAACGTCCGT TCACCGGGGA AGAGTATCTG
AAAAGCCTGC AGGATGGTCG CGAGATCTAT ATCTATGGCG AGCGAGTGAA AGACGTCACT
ACTCATCCGG CATTTCGTAA TGCGGCAGCG TCTGTTGCCC AACTGTACGA CGCGCTACAC
AAACCGGAGA TGCAGGACTC TCTGTGCTGG AACACCGACA CCGGCAGCGG CGGCTATACC
CATAAATTCT TCCGCGTGGC GAAAAGTGCC GACGACCTGC GCCAGCAACG CGATGCCATC
GCTGAGTGGT CACGCCTGAG CTATGGCTGG ATGGGCCGTA CCCCAGACTA CAAAGCTGCT
TTCGGTTGCG CACTGGGCGC GAATCCGGGC TTTTACGGTC AGTTCGAGCA GAACGCCCGT
AACTGGTACA CCCGTATTCA GGAAACTGGC CTCTACTTTA ACCACGCGAT TGTTAACCCA
CCGATCGATC GTCATTTGCC GACCGATAAA GTAAAAGACG TTTACATCAA GCTGGAAAAA
GAGACTGACG CCGGGATTAT CGTCAGCGGT GCGAAAGTGG TTGCCACCAA CTCGGCGCTG
ACTCACTACA ACATGATTGG CTTCGGCTCG GCACAAGTGA TGGGCGAAAA CCCGGACTTC
GCACTGATGT TCGTTGCGCC AATGGATGCC GATGGCGTAA AATTAATCTC CCGCGCCTCT
TATGAGATGG TCGCGGGTGC TACCGGCTCG CCATACGACT ACCCGCTCTC CAGCCGCTTC
GATGAGAACG ATGCGATTCT GGTGATGGAT AACGTGCTGA TCCCATGGGA AAACGTACTG
ATCTACCGCG ATTTCGATCG CTGCCGTCGC TGGACAATGG AAGGCGGTTT TGCCCGTATG
TATCCGCTGC AAGCCTGTGT GCGCCTGGCA GTGAAATTAG ACTTCATTAC AGCACTGCTG
AAAAAATCAC TCGAATGTAC CGGCACCCTG GAGTTCCGTG GTGTACAGGC CGATCTCGGT
GAAGTGGTGG CGTGGCGCAA CACCTTCTGG GCATTGAGTG ACTCGATGTG TTCTGAAGCG
ACGCCGTGGG TCAACGGGGC TTATTTACCG GATCATGCCG CACTGCAAAC CTATCGCGTA
CTGGCACCAA TGGCCTACGC GAAGATCAAA AACATTATCG AACGCAACGT TACCAGTGGC
CTGATCTATC TCCCTTCCAG TGCCCGTGAC CTGAACAATC CGCAGATCGA CCAGTATCTG
GCGAAGTATG TGCGCGGTTC GAATGGTATG GATCACGTCC AGCACATCAA GATCCTCAAA
CTGATGTGGG ACGCCATTGG CAGCGAGTTT GGTGGTCGCC ACGAACTGTA TGAAATCAAC
TACTCCGGTA GCCAGGATGA GATTCGCCTG CAGTGTCTGC GCCAGGCACA AAGCTCCGGC
AATATGGACA AGATGATGGC GATGGTTGAT CGCTGCCTGT CGGAATACGA CCAGAACGGC
TGGACTGTGC CGCACTTGCA CAACAACGAC GATATCAACA TGCTGGATAA GCTGCTGAAA
TAA
|
|---|
| Protein sequence | MKPEDFRAST QRPFTGEEYL KSLQDGREIY IYGERVKDVT THPAFRNAAA SVAQLYDALH
KPEMQDSLCW NTDTGSGGYT HKFFRVAKSA DDLRQQRDAI AEWSRLSYGW MGRTPDYKAA
FGCALGANPG FYGQFEQNAR NWYTRIQETG LYFNHAIVNP PIDRHLPTDK VKDVYIKLEK
ETDAGIIVSG AKVVATNSAL THYNMIGFGS AQVMGENPDF ALMFVAPMDA DGVKLISRAS
YEMVAGATGS PYDYPLSSRF DENDAILVMD NVLIPWENVL IYRDFDRCRR WTMEGGFARM
YPLQACVRLA VKLDFITALL KKSLECTGTL EFRGVQADLG EVVAWRNTFW ALSDSMCSEA
TPWVNGAYLP DHAALQTYRV LAPMAYAKIK NIIERNVTSG LIYLPSSARD LNNPQIDQYL
AKYVRGSNGM DHVQHIKILK LMWDAIGSEF GGRHELYEIN YSGSQDEIRL QCLRQAQSSG
NMDKMMAMVD RCLSEYDQNG WTVPHLHNND DINMLDKLLK
|
|---|
| |