39 homologs were found in PanDaTox collection
for query gene Mchl_1635 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_1635  transcriptional regulator, XRE family  100 
 
 		 116 aa  231  2.0000000000000002e-60  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0251  transcriptional regulator, XRE family  99.14 
 
 		 116 aa  228  2e-59  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_0168  XRE family transcriptional regulator  34.15 
 
 		 227 aa  50.4  0.000007  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_3015  putative prophage repressor  44.23 
 
 		 227 aa  48.1  0.00004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_2321  putative phage repressor  34.78 
 
 		 243 aa  47  0.00008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0230  transcriptional regulator  33.33 
 
 		 197 aa  44.3  0.0005  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
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NC_008345  Sfri_1656  transcriptional regulator, XRE family protein  38.1 
 
 		 72 aa  43.9  0.0007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.022858  n/a   
 
 
-
 
NC_011830  Dhaf_1789  transcriptional regulator, XRE family  32.79 
 
 		 198 aa  43.1  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000770501  n/a   
 
 
-
 
NC_013061  Phep_2086  helix-turn-helix domain protein  32.89 
 
 		 327 aa  43.1  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0272363  normal  0.126806 
 
 
-
 
NC_010814  Glov_0168  transcriptional regulator, XRE family  37.1 
 
 		 86 aa  42.4  0.002  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1458  transcriptional regulator, XRE family  22.99 
 
 		 114 aa  41.6  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009632  SaurJH1_0316  helix-turn-helix domain-containing protein  29.69 
 
 		 107 aa  40.8  0.006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011668  Sbal223_4446  putative phage repressor  33.9 
 
 		 209 aa  40.8  0.006  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_0309  XRE family transcriptional regulator  29.69 
 
 		 107 aa  40.8  0.006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.793931  n/a   
 
 
-
 
NC_009438  Sputcn32_3837  helix-turn-helix domain-containing protein  34.85 
 
 		 68 aa  40.8  0.006  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0903  helix-turn-helix domain-containing protein  28.79 
 
 		 255 aa  40.8  0.006  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000193278  n/a   
 
 
-
 
NC_013093  Amir_5476  transcriptional regulator, XRE family  43.64 
 
 		 761 aa  40.8  0.006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_3630  helix-turn-helix domain protein  40.62 
 
 		 429 aa  40.8  0.006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.904143  n/a   
 
 
-
 
NC_009997  Sbal195_3390  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.00303754 
 
 
-
 
NC_010468  EcolC_2058  transcriptional repressor DicA  30.84 
 
 		 135 aa  40.8  0.007  Escherichia coli ATCC 8739  Bacteria  normal  0.211333  normal  1 
 
 
-
 
NC_013947  Snas_1710  transcriptional regulator, XRE family  51.06 
 
 		 420 aa  40.4  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.371639  normal  0.199479 
 
 
-
 
NC_009997  Sbal195_3486  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS195  Bacteria  normal  0.106619  unclonable  0.00000623032 
 
 
-
 
CP001637  EcDH1_2073  transcriptional regulator, XRE family  30.84 
 
 		 135 aa  40.8  0.007  Escherichia coli DH1  Bacteria  normal  0.0932046  n/a   
 
 
-
 
NC_009997  Sbal195_1979  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS195  Bacteria  decreased coverage  0.000012505  normal  0.0449192 
 
 
-
 
NC_009665  Shew185_3362  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  normal  0.826369  n/a   
 
 
-
 
NC_009665  Shew185_3253  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2554  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1862  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  hitchhiker  0.000787798  n/a   
 
 
-
 
NC_009665  Shew185_1974  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  normal  0.030681  n/a   
 
 
-
 
NC_011891  A2cp1_2077  transcriptional regulator, XRE family  40.68 
 
 		 81 aa  40.4  0.008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5326  transcriptional regulator, XRE family  32.14 
 
 		 68 aa  40.4  0.008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.134062 
 
 
-
 
NC_007760  Adeh_1868  XRE family transcriptional regulator  40.68 
 
 		 81 aa  40.4  0.008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0746  transcriptional regulator, XRE family  41.67 
 
 		 64 aa  40.4  0.008  Eggerthella lenta DSM 2243  Bacteria  normal  0.376996  normal  1 
 
 
-
 
NC_011145  AnaeK_1992  transcriptional regulator, XRE family  40.68 
 
 		 81 aa  40.4  0.008  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2029  XRE family transcriptional regulator  41.86 
 
 		 71 aa  40.4  0.008  Shewanella baltica OS195  Bacteria  decreased coverage  0.0082126  normal  0.318531 
 
 
-
 
NC_008542  Bcen2424_0921  XRE family transcriptional regulator  33.87 
 
 		 132 aa  40.4  0.009  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0000830973  n/a   
 
 
-
 
NC_010001  Cphy_2912  XRE family transcriptional regulator  31.15 
 
 		 200 aa  40.4  0.009  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B0062  transcriptional regulator  31.25 
 
 		 211 aa  40.4  0.009  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_2958  transcriptional regulator HTH family  25.35 
 
 		 134 aa  40  0.01  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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