| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5476 |
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| Symbol | |
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| ID | 8329682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6503436 |
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| End bp | 6505721 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 644945916 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003103140 |
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| Protein GI | 256379480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCACAC CGCTGGGCGA CCTGCTGCGT CACCACCGGA CCCGCGCGGG GCTGACCCAG
GAGGACCTCG CCGAGGGCTC CGGCGTCAGC GTGCGCGCCA TCAGCGACGT GGAGCGCGGC
CGGGCCAGGG GTCCCCAGCG GCGCACCGTC GCCGCGCTCG CCGACGTGCT CGGGCTGGAC
GACGCGGACC GCTCCGAGCT GCTCGCCGCC GCCCAGCGCG GCCGGGCCCG CGCCACCCGC
TCGCCCGGTC CCCGCGCGCT CCCGCCGGAC CTGCCCGACC TCACCGGCCG CGCGGACGAG
CTGGCCGCGA TCCGCGCCGC CGCCGCGCGG GCCAGGGGCA CCGAGGTGGT CGCCGTGCAC
GGCGCCCCCG GTTCCGGCAA GACCAGCCTG GTCGTGCGGG CCGCCCACGA GCTGGCCGCC
TCCCACCCCG GCGGCTGCTT CTTCTTCGCC CTGCGCGGCG TCGACGCGAC GCCCGTGCGG
CCGGACGAGG TGACCCGGCG GGTGCTGGTG GCGCTGGGCG AGGACCCGCC GCACTCGGAG
GCCGAGCGCA CCGACCGCTA CCGGGCGCTG CTGCGGGAGC GCTCGACCGT GCTGGTGCTG
GACAACGCGC TCGACGAGGC CCAGGTCCGC CCGCTGCTGG CCGAGGGCGC GCGCTCCCTG
GTGCTGATCA CCTCCCACCA GGTCCTCGGC GGCCTGGAGG GCGCGACCCG GCTCGGCCTG
GACGTGCTGC GCGAGTCCGA GTCCACCGGG CTGCTGGCCG CCATCGCGGG CGAGGCGCGG
ACCGGCGCGG AGCCCGAGGC GACCCTGGCG GTCGCCCGGC TGTGCGGCGG CCTGCCGCTG
GCGCTGCGGA TCGCGGGGAA CCGCCTGGTC TCCCGTCCGA GGTGGACGGT CGCGCACCTG
GCCGCGAGGC TGGGCGACGA GCGCCGCAGG CTGTCCGCGC TCACGGCGGG CGACCTGGGC
GTGCGCCCCG CGTTCGAGCT GTCCTACCGC CAGCTCGCCC CGCTGCCGCG GGCGCTGTTC
CGGGCGTTGT CGCTGCTCCC CGGTTCGGGC TGCGCCCCGG AGTCGGCGGC GGTGGCGCTG
GACGTCGACG CGGTCACCGC CGAGGACGCC CTGGACGAGC TGGTGGACGC GAGCCTGCTC
GGCACGGCGG AGGAGCCCGG CCGGTACGCG CTGCACGACC TGCTGCGGGT GTTCGCGGGC
GAGCGCCTGG CCGCCGAGTC CGACCCGGCC GCCGTCGTGG CGGCGCGGGA GCGGCTGGAC
GGCTGGTTCC TGGACCGCGC CACCACCGCG CTGTCGTTCT ACGGCACCGA GGCCAGGCAG
GAGCCCGCCG ACGGCCTCGC CGACGCGGCC GAGGCGGACG CCTGGCTGGT GGCCGAGCTG
TCGAACTGGC TGGGCGCGCT GGACCGGACC GCCGGGGCGG GCGGGCACGA GCGGGTGCTG
CGGCTGGCCT CGGCCGCGCA CTGGTACTCC GACCAGCACG GCGACGCCAC CACCTGGGAG
CGGGTGTTCG GGGCCGGGGT GGCCGCCGCG CGGGCGCTGG GCAGCGCGCG CGACGAGGCG
GTGCAGCTGA ACTTCCTGAC CTGGGTGCTG GTGGTGCTGC GCGGCTCCCC CGAGCGGGGC
CTGGCGCTGC ACGACCTGGC GCGGGCGGCG GCGGTGTCGG CGGGGGACGT GCGCGAGCAG
GGCTGGGCCG CGCACTACCG GGCGCTGGCG CTGCGCCGGG CCGGTGACCT GGAGGGCGCG
CGGCGCAGCG CGGTGCGGGC GCAGGAGCTG TTCCTGGCGG CCGGGTACCC GCTGGGCGCG
CACATCGCGG GCAGCGCGCT GGGGCAGGTG CTGGCGCAGG CGCGGCGGCA CGCGGAGGCC
GAGGCCGTGC ACCGGGGGCT GCTGGCGGCG GTGCGCGCGG ACGAGGCGGG GCTGCGCCCG
GAGATGCGGG ACGCGCTGGA GGCGGCGCTG CTGATGCAGC TGGCCGACGC GCTGGCCGGG
CTGGAGCGGT GGGCCGAGGT GGTGGCGGTG GCGCGGGAGG CCGTCGGGCT GGCCGCGGGC
GCGCGGTCGC CGGTCACGGA GCTCAGGGCG CGGCTCGCGG TCGGGGTGGC GCTGCACCGG
TCGGGCGCGC TGCCGGAGGC GAGGGCGGAG CTGGAGCGGG CGTTGGAGCT GGGCGGCGAG
CGCGGCAGGC CGAGCCTGCC GGACGTGCTG GACGCGCTGG CCGGGGTGCT CGACGACCTG
GGCGACCCGC GCGCGAGCGG GCAGCTGCGC GCGCGGGCCG CCGAACTCCG GTCAGCCGAT
CGGTGA
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| Protein sequence | MATPLGDLLR HHRTRAGLTQ EDLAEGSGVS VRAISDVERG RARGPQRRTV AALADVLGLD
DADRSELLAA AQRGRARATR SPGPRALPPD LPDLTGRADE LAAIRAAAAR ARGTEVVAVH
GAPGSGKTSL VVRAAHELAA SHPGGCFFFA LRGVDATPVR PDEVTRRVLV ALGEDPPHSE
AERTDRYRAL LRERSTVLVL DNALDEAQVR PLLAEGARSL VLITSHQVLG GLEGATRLGL
DVLRESESTG LLAAIAGEAR TGAEPEATLA VARLCGGLPL ALRIAGNRLV SRPRWTVAHL
AARLGDERRR LSALTAGDLG VRPAFELSYR QLAPLPRALF RALSLLPGSG CAPESAAVAL
DVDAVTAEDA LDELVDASLL GTAEEPGRYA LHDLLRVFAG ERLAAESDPA AVVAARERLD
GWFLDRATTA LSFYGTEARQ EPADGLADAA EADAWLVAEL SNWLGALDRT AGAGGHERVL
RLASAAHWYS DQHGDATTWE RVFGAGVAAA RALGSARDEA VQLNFLTWVL VVLRGSPERG
LALHDLARAA AVSAGDVREQ GWAAHYRALA LRRAGDLEGA RRSAVRAQEL FLAAGYPLGA
HIAGSALGQV LAQARRHAEA EAVHRGLLAA VRADEAGLRP EMRDALEAAL LMQLADALAG
LERWAEVVAV AREAVGLAAG ARSPVTELRA RLAVGVALHR SGALPEARAE LERALELGGE
RGRPSLPDVL DALAGVLDDL GDPRASGQLR ARAAELRSAD R
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