| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2554 |
|---|
| Symbol | |
|---|
| ID | 5369494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3053161 |
|---|
| End bp | 3053376 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830765 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001366752 |
|---|
| Protein GI | 153001071 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATC GCGCCGCGGA TGTATTGAAA GTAGGGCGCC GTTTACGGGG CATGACCCAA
GACGAAGTGG CTGAGATTTA CGGCATTAGC CGCAACACTT ACCAACGTTG GGAAAATGGC
CGTACTACTG CGCCCTATGA CGATGTGACA TCGATATGCC TTGATGTGTT TAAGCTTTCC
ATCGAGAAGA TAAATGAGGT GGCCAATGGG CTTTAG
|
|---|
| Protein sequence | MANRAADVLK VGRRLRGMTQ DEVAEIYGIS RNTYQRWENG RTTAPYDDVT SICLDVFKLS
IEKINEVANG L
|
|---|
| |