25 homologs were found in PanDaTox collection
for query gene Shew185_2554 on replicon NC_009665
Organism: Shewanella baltica OS185



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009665  Shew185_1862  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS185  Bacteria  hitchhiker  0.000787798  n/a   
 
 
-
 
NC_009665  Shew185_1974  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS185  Bacteria  normal  0.030681  n/a   
 
 
-
 
NC_009665  Shew185_2554  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3253  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3362  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS185  Bacteria  normal  0.826369  n/a   
 
 
-
 
NC_009997  Sbal195_1979  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS195  Bacteria  decreased coverage  0.000012505  normal  0.0449192 
 
 
-
 
NC_009997  Sbal195_3486  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS195  Bacteria  normal  0.106619  unclonable  0.00000623032 
 
 
-
 
NC_009997  Sbal195_3390  XRE family transcriptional regulator  100 
 
 		 71 aa  147  3e-35  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.00303754 
 
 
-
 
NC_009997  Sbal195_2029  XRE family transcriptional regulator  98.59 
 
 		 71 aa  147  7e-35  Shewanella baltica OS195  Bacteria  decreased coverage  0.0082126  normal  0.318531 
 
 
-
 
NC_009997  Sbal195_0776  XRE family transcriptional regulator  60 
 
 		 72 aa  96.3  1e-19  Shewanella baltica OS195  Bacteria  normal  0.62299  hitchhiker  0.00396946 
 
 
-
 
NC_009665  Shew185_0746  XRE family transcriptional regulator  60 
 
 		 72 aa  95.9  2e-19  Shewanella baltica OS185  Bacteria  normal  0.205768  n/a   
 
 
-
 
NC_009052  Sbal_3609  XRE family transcriptional regulator  58.57 
 
 		 72 aa  94.4  5e-19  Shewanella baltica OS155  Bacteria  hitchhiker  0.000857822  n/a   
 
 
-
 
NC_011663  Sbal223_0773  transcriptional regulator, XRE family  57.97 
 
 		 72 aa  89.7  1e-17  Shewanella baltica OS223  Bacteria  hitchhiker  0.00619674  normal  0.231012 
 
 
-
 
NC_008345  Sfri_1656  transcriptional regulator, XRE family protein  57.14 
 
 		 72 aa  88.2  3e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.022858  n/a   
 
 
-
 
NC_007954  Sden_3260  transciptional regulator  56.52 
 
 		 76 aa  85.9  2e-16  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00055774  n/a   
 
 
-
 
NC_007971  Rmet_6072  putative transcriptional regulator Cro/CI family  37.5 
 
 		 233 aa  44.3  0.0005  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.406393 
 
 
-
 
NC_011830  Dhaf_1621  transcriptional regulator, XRE family  37.7 
 
 		 368 aa  43.9  0.0008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2300  XRE family transcriptional regulator  37.5 
 
 		 127 aa  42.4  0.002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2304  XRE family transcriptional regulator  37.5 
 
 		 127 aa  42.4  0.002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2296  XRE family transcriptional regulator  37.5 
 
 		 127 aa  42.4  0.002  Shewanella baltica OS195  Bacteria  normal  0.488898  normal  1 
 
 
-
 
NC_009997  Sbal195_2292  XRE family transcriptional regulator  37.5 
 
 		 127 aa  42.4  0.002  Shewanella baltica OS195  Bacteria  normal  1  normal  0.625502 
 
 
-
 
NC_012856  Rpic12D_2696  transcriptional regulator, XRE family  30 
 
 		 117 aa  42.7  0.002  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A3209  helix-turn-helix domain protein  43.18 
 
 		 153 aa  41.2  0.005  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013171  Apre_1191  transcriptional regulator, XRE family  32.79 
 
 		 134 aa  41.2  0.005  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.000106363  n/a   
 
 
-
 
NC_009664  Krad_1949  transcriptional regulator, XRE family  39.22 
 
 		 307 aa  40.4  0.009  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
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