Gene Snas_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1710 
Symbol 
ID8882900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1800350 
End bp1801612 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003510502 
Protein GI291299224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.371639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.199479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGCG GTGAACTGGC GGCGCGGCGG CGCGCCCGGG GCCACACGCA GGAGACCCTC 
GCCCAGCGGC TCGGCGTCAA CGTCTCCAGC GTCGCCCGTT GGGAACGCGG CCTGGCCATC
CCGTACCCGC ACGTCCGCCG GGCCCTGGCC GAGGAACTGG GCCTGCCCGT CGAGGAACTC
ACCGCCCTGC TCACCCCCGC CGCCGACCCC GAACCCGCCG CCCCGTCCGA ATCCGTGCCA
CCGTCCTGGA ACCGTCGCCG CCTGGAAGCG CTCGCGACCG GCCTGCGCGG CGCGCAACCG
GCCACCGACA CCCCCGGCCA CGCCGCCCAC GCCTGGCTCG TCACGCCGCC GCCTGCGGAG
TGGAGCTGGC TGGCCACCCG GATCCGCGAC CACCACCGCC CCGCCATCGG CTCCGCGACC
ATCGCCCGGA TCCGGGCCCG CACCGACTAC CTGCGCACGG CCGACGACAT CGTCGCCGGA
GGCGACCTGC ACCACACGAT CCAGCGCGAA CTGGCCGTCA CCGCCGAGCT GCTGTCCACC
ACCCGATACA CCGACCACAT CGGACGCCAG CTGCTCGCTG CCCTCGCGGA ACTGAGTCAG
CTGTGTGGAT GGTCCACGGC CGACGCCGCA GACCCGGCTC GCGCCACCGG CTACTACCTC
AGCGGCATCG CCGCCGCCCA CGCCGCCGAC CTGCCCGAAC TCGGCGCCGA GCTCACCTCC
GCGCTCGCCT ACCACCTCAC CGAGACCAAC GGCGACGCCG CCGAAGCCGT CCTGGTGGCC
CGCTCCGCGC TGGCCGGTCT GCGACGGCTC GACGCGCCCA CGCCCCGCAT GCTCGCCATG
GTCCACGCGC GACTGGCCTG GGCCCTCAAC GCCGCTGGCG AAACCCGATC GGCCCTCGAC
GCCATGAACC GGGCCCAGGA CCACTTCGCC GCCCGCGACG ACACCCGCCC CGACCCCGGC
TGGCTCTACT GGCTGTCAGC CTCCGAGATG GACATCATCG TCGGCCGCTT CGAAGCCGCC
ACCCACCAAC CCGAAGCGGC CCAACGGCGG CTGCGCACCT CACTGTCCCA ATGCGACCCC
CACCACGTCC GCGAACACAC CCTGTACACC ACCTGGCTGG CCCACACCTA CCTCGACACC
GGCGACACCG ACCAGGCCGC CGACCTGGCC CAGCACTGCC AACGCCTCGA CGCCACCATC
GACTCCGCCT TCAGCCGCCG CGCCGTCCAC CACCTCACCA ACCGGCTCAC GACCCCGGCT
TAG
 
Protein sequence
MRRGELAARR RARGHTQETL AQRLGVNVSS VARWERGLAI PYPHVRRALA EELGLPVEEL 
TALLTPAADP EPAAPSESVP PSWNRRRLEA LATGLRGAQP ATDTPGHAAH AWLVTPPPAE
WSWLATRIRD HHRPAIGSAT IARIRARTDY LRTADDIVAG GDLHHTIQRE LAVTAELLST
TRYTDHIGRQ LLAALAELSQ LCGWSTADAA DPARATGYYL SGIAAAHAAD LPELGAELTS
ALAYHLTETN GDAAEAVLVA RSALAGLRRL DAPTPRMLAM VHARLAWALN AAGETRSALD
AMNRAQDHFA ARDDTRPDPG WLYWLSASEM DIIVGRFEAA THQPEAAQRR LRTSLSQCDP
HHVREHTLYT TWLAHTYLDT GDTDQAADLA QHCQRLDATI DSAFSRRAVH HLTNRLTTPA