33 homologs were found in PanDaTox collection
for query gene M446_2273 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_2273  hypothetical protein  100 
 
 
94 aa  189  8e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0436574 
 
 
-
 
NC_011894  Mnod_0329  hypothetical protein  76.6 
 
 
100 aa  145  2.0000000000000003e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0612063  n/a   
 
 
-
 
NC_010725  Mpop_0916  putative transcriptional regulator, XRE family  46.81 
 
 
108 aa  73.6  0.0000000000009  Methylobacterium populi BJ001  Bacteria  normal  normal  0.607361 
 
 
-
 
NC_010172  Mext_0976  hypothetical protein  43.62 
 
 
108 aa  67.8  0.00000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.393321  normal  0.0849399 
 
 
-
 
NC_011757  Mchl_0940  hypothetical protein  43.62 
 
 
92 aa  67.4  0.00000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0809559  normal 
 
 
-
 
NC_010505  Mrad2831_3659  hypothetical protein  45.56 
 
 
107 aa  67  0.00000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.274264  normal  0.101652 
 
 
-
 
NC_010581  Bind_3182  XRE family transcriptional regulator  37.63 
 
 
217 aa  48.5  0.00003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  hitchhiker  0.0000000447184  normal  0.0403938 
 
 
-
 
NC_012850  Rleg_1303  hypothetical protein  31.25 
 
 
97 aa  47.8  0.00005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.840388  normal 
 
 
-
 
NC_007964  Nham_0207  XRE family transcriptional regulator  40 
 
 
75 aa  47.4  0.00007  Nitrobacter hamburgensis X14  Bacteria  normal  0.0720343  n/a   
 
 
-
 
NC_011366  Rleg2_5911  putative transcriptional regulator, XRE family  41.67 
 
 
105 aa  47.4  0.00007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.432156 
 
 
-
 
NC_011369  Rleg2_1214  hypothetical protein  31.25 
 
 
97 aa  47  0.00008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8419  transcriptional regulator, XRE family  40.62 
 
 
490 aa  46.6  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.310516  n/a   
 
 
-
 
NC_011666  Msil_2974  hypothetical protein  38.04 
 
 
96 aa  46.2  0.0001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.157129 
 
 
-
 
NC_010511  M446_3328  XRE family transcriptional regulator  40.28 
 
 
77 aa  45.8  0.0002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6201  XRE family transcriptional regulator  43.33 
 
 
1350 aa  45.4  0.0003  Burkholderia sp. 383  Bacteria  normal  0.692672  normal 
 
 
-
 
NC_010374  M446_7049  hypothetical protein  44.64 
 
 
90 aa  45.1  0.0004  Methylobacterium sp. 4-46  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3179  XRE family transcriptional regulator  42.62 
 
 
83 aa  44.7  0.0005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.233031  n/a   
 
 
-
 
NC_009720  Xaut_4299  XRE family transcriptional regulator  35.48 
 
 
95 aa  44.3  0.0005  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011888  Mnod_7736  transcriptional regulator, XRE family  40.98 
 
 
86 aa  43.5  0.001  Methylobacterium nodulans ORS 2060  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_3679  hypothetical protein  39.06 
 
 
83 aa  43.5  0.001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1498  hypothetical protein  36.71 
 
 
85 aa  43.1  0.001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.152901  normal  0.507716 
 
 
-
 
NC_004310  BR0264  hypothetical protein  41.43 
 
 
86 aa  42.7  0.002  Brucella suis 1330  Bacteria  normal  0.926101  n/a   
 
 
-
 
NC_014165  Tbis_3045  XRE family transcriptional regulator  43.08 
 
 
406 aa  42.4  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.181635  normal 
 
 
-
 
NC_009719  Plav_3526  XRE family transcriptional regulator  40.98 
 
 
88 aa  41.6  0.003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.335208  normal  0.820546 
 
 
-
 
NC_009719  Plav_1209  XRE family transcriptional regulator  40.98 
 
 
88 aa  41.6  0.003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0894  XRE family transcriptional regulator  37.97 
 
 
83 aa  42  0.003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0403499  n/a   
 
 
-
 
NC_009667  Oant_1782  DNA-binding protein  38.46 
 
 
82 aa  41.6  0.004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.684627  n/a   
 
 
-
 
NC_012858  Rleg_6881  transcriptional regulator, XRE family  35 
 
 
106 aa  41.6  0.004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.879707  normal  0.858405 
 
 
-
 
NC_011365  Gdia_1039  hypothetical protein  40.91 
 
 
94 aa  41.2  0.005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0953795  normal 
 
 
-
 
NC_009720  Xaut_0714  XRE family transcriptional regulator  40.98 
 
 
87 aa  40.4  0.008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.563976  normal 
 
 
-
 
NC_009720  Xaut_3020  XRE family transcriptional regulator  39.34 
 
 
84 aa  40.4  0.009  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3071  transcriptional regulator, XRE family  39.34 
 
 
84 aa  40.4  0.009  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1230  helix-turn-helix domain-containing protein  42.03 
 
 
85 aa  40.4  0.009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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