29 homologs were found in PanDaTox collection
for query gene Mrad2831_3659 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_3659  hypothetical protein  100 
 
 
107 aa  208  2e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.274264  normal  0.101652 
 
 
-
 
NC_010172  Mext_0976  hypothetical protein  65.74 
 
 
108 aa  127  3e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.393321  normal  0.0849399 
 
 
-
 
NC_010725  Mpop_0916  putative transcriptional regulator, XRE family  62.96 
 
 
108 aa  123  7e-28  Methylobacterium populi BJ001  Bacteria  normal  normal  0.607361 
 
 
-
 
NC_011757  Mchl_0940  hypothetical protein  67.39 
 
 
92 aa  114  6e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0809559  normal 
 
 
-
 
NC_011894  Mnod_0329  hypothetical protein  47.78 
 
 
100 aa  73.9  0.0000000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0612063  n/a   
 
 
-
 
NC_010511  M446_2273  hypothetical protein  45.56 
 
 
94 aa  67  0.00000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0436574 
 
 
-
 
NC_012850  Rleg_0324  hypothetical protein  36.84 
 
 
99 aa  52.4  0.000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.929331 
 
 
-
 
NC_010338  Caul_0335  DNA-binding protein  44.16 
 
 
89 aa  50.8  0.000006  Caulobacter sp. K31  Bacteria  normal  0.372154  normal 
 
 
-
 
NC_011369  Rleg2_0293  hypothetical protein  35.9 
 
 
84 aa  50.1  0.00001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_010581  Bind_3182  XRE family transcriptional regulator  45 
 
 
217 aa  49.3  0.00002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  hitchhiker  0.0000000447184  normal  0.0403938 
 
 
-
 
NC_009485  BBta_1498  hypothetical protein  39.51 
 
 
85 aa  47.4  0.00006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.152901  normal  0.507716 
 
 
-
 
NC_011892  Mnod_8419  transcriptional regulator, XRE family  35.29 
 
 
490 aa  47  0.00008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.310516  n/a   
 
 
-
 
NC_011888  Mnod_7736  transcriptional regulator, XRE family  38.1 
 
 
86 aa  46.6  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  n/a    n/a   
 
 
-
 
NC_007510  Bcep18194_A6201  XRE family transcriptional regulator  40 
 
 
1350 aa  45.4  0.0002  Burkholderia sp. 383  Bacteria  normal  0.692672  normal 
 
 
-
 
NC_007964  Nham_0207  XRE family transcriptional regulator  38.71 
 
 
75 aa  46.2  0.0002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0720343  n/a   
 
 
-
 
NC_011366  Rleg2_5911  putative transcriptional regulator, XRE family  32.58 
 
 
105 aa  45.1  0.0003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.432156 
 
 
-
 
NC_010505  Mrad2831_1230  helix-turn-helix domain-containing protein  38.96 
 
 
85 aa  43.9  0.0007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2449  hypothetical protein  45.16 
 
 
88 aa  43.9  0.0007  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4299  XRE family transcriptional regulator  36.36 
 
 
95 aa  43.1  0.001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0894  XRE family transcriptional regulator  37.8 
 
 
83 aa  43.1  0.001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0403499  n/a   
 
 
-
 
NC_010511  M446_3328  XRE family transcriptional regulator  36.99 
 
 
77 aa  42.4  0.002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010374  M446_7049  hypothetical protein  40.91 
 
 
90 aa  42.7  0.002  Methylobacterium sp. 4-46  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4671  hypothetical protein  48.72 
 
 
87 aa  42.7  0.002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1303  hypothetical protein  33.33 
 
 
97 aa  42  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.840388  normal 
 
 
-
 
NC_011666  Msil_2974  hypothetical protein  35.96 
 
 
96 aa  41.2  0.005  Methylocella silvestris BL2  Bacteria  n/a    normal  0.157129 
 
 
-
 
NC_011757  Mchl_4134  transcriptional regulator, XRE family  37.33 
 
 
267 aa  41.2  0.005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1214  hypothetical protein  33.33 
 
 
97 aa  40.8  0.006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3825  GAF domain-containing protein  37.33 
 
 
276 aa  40.8  0.006  Methylobacterium extorquens PA1  Bacteria  normal  0.0507581  normal 
 
 
-
 
NC_012858  Rleg_6881  transcriptional regulator, XRE family  31.76 
 
 
106 aa  40.8  0.006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.879707  normal  0.858405 
 
 
-
 
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