More than 300 homologs were found in PanDaTox collection
for query gene Lcho_0947 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0947  chromosome replication initiation inhibitor protein  100 
 
 
311 aa  616  1e-175  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A3518  chromosome replication initiation inhibitor protein  67.88 
 
 
312 aa  375  1e-103  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0095  chromosome replication initiation inhibitor protein  56.03 
 
 
304 aa  313  1.9999999999999998e-84  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.720683 
 
 
-
 
NC_007948  Bpro_0149  chromosome replication initiation inhibitor protein  53.9 
 
 
304 aa  298  6e-80  Polaromonas sp. JS666  Bacteria  normal  0.898117  normal 
 
 
-
 
NC_008782  Ajs_0072  chromosome replication initiation inhibitor protein  52.26 
 
 
303 aa  291  1e-77  Acidovorax sp. JS42  Bacteria  normal  0.608118  normal 
 
 
-
 
NC_011992  Dtpsy_0091  chromosome replication initiation inhibitor protein  52.26 
 
 
303 aa  291  1e-77  Acidovorax ebreus TPSY  Bacteria  normal  0.730131  n/a   
 
 
-
 
NC_008752  Aave_0132  chromosome replication initiation inhibitor protein  53.9 
 
 
305 aa  288  7e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.350257 
 
 
-
 
NC_008786  Veis_5010  chromosome replication initiation inhibitor protein  53.9 
 
 
305 aa  285  7e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.501331  normal 
 
 
-
 
NC_007908  Rfer_0399  chromosome replication initiation inhibitor protein  52.13 
 
 
302 aa  266  2.9999999999999995e-70  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2987  chromosome replication initiation inhibitor protein  40.36 
 
 
299 aa  202  5e-51  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2384  transcriptional regulator, ArgP, LysR family  41.86 
 
 
298 aa  197  1.0000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.758933 
 
 
-
 
NC_010524  Lcho_0982  LysR family transcriptional regulator  42.45 
 
 
300 aa  197  2.0000000000000003e-49  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008577  Shewana3_1652  chromosome replication initiation inhibitor protein  39.93 
 
 
305 aa  193  3e-48  Shewanella sp. ANA-3  Bacteria  normal  0.963239  normal 
 
 
-
 
NC_009901  Spea_1974  chromosome replication initiation inhibitor protein  38.18 
 
 
296 aa  192  4e-48  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0576454  n/a   
 
 
-
 
NC_008321  Shewmr4_2344  chromosome replication initiation inhibitor protein  39.79 
 
 
305 aa  193  4e-48  Shewanella sp. MR-4  Bacteria  normal  0.0367629  hitchhiker  0.0000000918792 
 
 
-
 
NC_008322  Shewmr7_2416  chromosome replication initiation inhibitor protein  39.22 
 
 
305 aa  193  4e-48  Shewanella sp. MR-7  Bacteria  normal  0.343193  hitchhiker  0.00112785 
 
 
-
 
NC_009092  Shew_1844  chromosome replication initiation inhibitor protein  39.27 
 
 
295 aa  191  9e-48  Shewanella loihica PV-4  Bacteria  normal  0.225634  normal  0.103464 
 
 
-
 
NC_004347  SO_2866  chromosome replication initiation inhibitor protein  39.24 
 
 
306 aa  191  1e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1650  chromosome replication initiation inhibitor protein  40.53 
 
 
298 aa  191  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.216692  normal  0.124746 
 
 
-
 
NC_013757  Gobs_0665  transcriptional regulator, LysR family  43.31 
 
 
299 aa  191  2e-47  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.409403  n/a   
 
 
-
 
NC_009438  Sputcn32_1698  chromosome replication initiation inhibitor protein  38.6 
 
 
309 aa  189  4e-47  Shewanella putrefaciens CN-32  Bacteria  normal  0.52148  n/a   
 
 
-
 
NC_009665  Shew185_2594  chromosome replication initiation inhibitor protein  37.85 
 
 
311 aa  189  4e-47  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000186754  n/a   
 
 
-
 
NC_010506  Swoo_2173  chromosome replication initiation inhibitor protein  38.18 
 
 
297 aa  189  5e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.342879  normal 
 
 
-
 
NC_009052  Sbal_2556  chromosome replication initiation inhibitor protein  37.5 
 
 
311 aa  189  7e-47  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000319404  n/a   
 
 
-
 
NC_008781  Pnap_3699  chromosome replication initiation inhibitor protein  40.73 
 
 
297 aa  188  9e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.792839 
 
 
-
 
NC_011663  Sbal223_1788  chromosome replication initiation inhibitor protein  37.5 
 
 
311 aa  188  9e-47  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000000405332  unclonable  0.00000000000392786 
 
 
-
 
NC_008391  Bamb_4815  chromosome replication initiation inhibitor protein  40.15 
 
 
301 aa  188  1e-46  Burkholderia ambifaria AMMD  Bacteria  normal  0.173708  normal 
 
 
-
 
NC_010552  BamMC406_5362  chromosome replication initiation inhibitor protein  40.07 
 
 
301 aa  187  2e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  0.217291  normal 
 
 
-
 
NC_011071  Smal_1175  chromosome replication initiation inhibitor protein  44.24 
 
 
297 aa  187  2e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.578075  normal 
 
 
-
 
NC_011662  Tmz1t_3749  transcriptional regulator, ArgP, LysR family  41.64 
 
 
303 aa  187  2e-46  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2671  chromosome replication initiation inhibitor protein  37.15 
 
 
311 aa  186  4e-46  Shewanella baltica OS195  Bacteria  decreased coverage  0.000215658  normal 
 
 
-
 
NC_007511  Bcep18194_B0180  chromosome replication initiation inhibitor protein  39.42 
 
 
301 aa  186  6e-46  Burkholderia sp. 383  Bacteria  normal  normal  0.240236 
 
 
-
 
NC_010086  Bmul_3312  chromosome replication initiation inhibitor protein  39.42 
 
 
301 aa  185  9e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.028913  normal  0.162228 
 
 
-
 
NC_008061  Bcen_5388  chromosome replication initiation inhibitor protein  39.42 
 
 
301 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4796  chromosome replication initiation inhibitor protein  39.42 
 
 
301 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.43549  normal 
 
 
-
 
NC_008543  Bcen2424_5473  chromosome replication initiation inhibitor protein  39.42 
 
 
301 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.259043  normal  0.391167 
 
 
-
 
NC_007519  Dde_3474  chromosome replication initiation inhibitor protein  40.27 
 
 
316 aa  183  4.0000000000000006e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2058  chromosome replication initiation inhibitor protein  39.86 
 
 
303 aa  182  5.0000000000000004e-45  Rhodoferax ferrireducens T118  Bacteria  normal  0.215595  n/a   
 
 
-
 
NC_010002  Daci_2836  chromosome replication initiation inhibitor protein  38.46 
 
 
301 aa  182  9.000000000000001e-45  Delftia acidovorans SPH-1  Bacteria  normal  0.284111  normal  0.240548 
 
 
-
 
NC_009075  BURPS668_A0429  chromosome replication initiation inhibitor protein  40 
 
 
325 aa  182  9.000000000000001e-45  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0050  chromosome replication initiation inhibitor protein  40 
 
 
297 aa  181  1e-44  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2434  chromosome replication initiation inhibitor protein  37.09 
 
 
295 aa  181  2e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  0.609977  hitchhiker  0.000411507 
 
 
-
 
NC_010086  Bmul_5298  chromosome replication initiation inhibitor protein  40.36 
 
 
297 aa  180  2.9999999999999997e-44  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1772  chromosome replication initiation inhibitor protein  39.64 
 
 
325 aa  180  2.9999999999999997e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  0.188561  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0336  chromosome replication initiation inhibitor protein  39.64 
 
 
325 aa  180  2.9999999999999997e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0036  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  179  4e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3162  chromosome replication initiation inhibitor protein  41.16 
 
 
303 aa  179  4.999999999999999e-44  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1833  chromosome replication initiation inhibitor protein  39.64 
 
 
325 aa  179  4.999999999999999e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  0.565601  n/a   
 
 
-
 
NC_011992  Dtpsy_2509  chromosome replication initiation inhibitor protein  41.16 
 
 
303 aa  179  4.999999999999999e-44  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0034  chromosome replication initiation inhibitor protein  37.66 
 
 
297 aa  179  4.999999999999999e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1126  chromosome replication initiation inhibitor protein  39.64 
 
 
325 aa  179  4.999999999999999e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0698805  n/a   
 
 
-
 
NC_008784  BMASAVP1_0835  chromosome replication initiation inhibitor protein  39.64 
 
 
319 aa  179  4.999999999999999e-44  Burkholderia mallei SAVP1  Bacteria  normal  0.0738995  n/a   
 
 
-
 
NC_009079  BMA10247_A2099  chromosome replication initiation inhibitor protein  39.64 
 
 
325 aa  179  4.999999999999999e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2146  chromosome replication initiation inhibitor protein  40 
 
 
323 aa  179  7e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3409  transcriptional regulator ArgP, LysR family  40.81 
 
 
299 aa  179  7e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.305012  normal  0.0118196 
 
 
-
 
NC_008784  BMASAVP1_1183  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  177  1e-43  Burkholderia mallei SAVP1  Bacteria  normal  0.893969  n/a   
 
 
-
 
NC_006349  BMAA0030  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  177  1e-43  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1463  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  177  1e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0036  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  177  1e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2433  chromosome replication initiation inhibitor protein  37.62 
 
 
302 aa  177  2e-43  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3863  chromosome replication initiation inhibitor protein  42.12 
 
 
298 aa  177  2e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.807931 
 
 
-
 
NC_008752  Aave_1573  chromosome replication initiation inhibitor protein  40.94 
 
 
318 aa  176  4e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  0.187685  normal 
 
 
-
 
NC_007348  Reut_B3693  chromosome replication initiation inhibitor protein  41.24 
 
 
306 aa  176  4e-43  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1538  chromosome replication initiation inhibitor protein  39.29 
 
 
297 aa  176  4e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0880  chromosome replication initiation inhibitor protein  37.32 
 
 
284 aa  176  4e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_0711  chromosome replication initiation inhibitor protein  40.94 
 
 
308 aa  176  6e-43  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3485  transcriptional regulator, ArgP, LysR family  43.89 
 
 
299 aa  175  9e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.493863 
 
 
-
 
NC_008699  Noca_4431  chromosome replication initiation inhibitor protein  40.73 
 
 
293 aa  175  9.999999999999999e-43  Nocardioides sp. JS614  Bacteria  normal  0.615047  n/a   
 
 
-
 
NC_012856  Rpic12D_1704  chromosome replication initiation inhibitor protein  42.34 
 
 
298 aa  175  9.999999999999999e-43  Ralstonia pickettii 12D  Bacteria  normal  0.305056  normal 
 
 
-
 
NC_007511  Bcep18194_B3139  chromosome replication initiation inhibitor protein  39.29 
 
 
297 aa  174  1.9999999999999998e-42  Burkholderia sp. 383  Bacteria  normal  0.677329  normal 
 
 
-
 
NC_011071  Smal_1085  chromosome replication initiation inhibitor protein  38.18 
 
 
301 aa  174  1.9999999999999998e-42  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0282228  normal 
 
 
-
 
NC_008391  Bamb_5007  chromosome replication initiation inhibitor protein  39.29 
 
 
297 aa  174  1.9999999999999998e-42  Burkholderia ambifaria AMMD  Bacteria  normal  0.633447  normal 
 
 
-
 
NC_007948  Bpro_4491  chromosome replication initiation inhibitor protein  37.94 
 
 
309 aa  173  2.9999999999999996e-42  Polaromonas sp. JS666  Bacteria  normal  normal  0.965976 
 
 
-
 
NC_008541  Arth_0393  chromosome replication initiation inhibitor protein  35.53 
 
 
293 aa  173  3.9999999999999995e-42  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3148  chromosome replication initiation inhibitor protein  39.29 
 
 
297 aa  172  5e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  0.99123  normal 
 
 
-
 
NC_010515  Bcenmc03_4487  chromosome replication initiation inhibitor protein  38.93 
 
 
297 aa  172  5.999999999999999e-42  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5736  chromosome replication initiation inhibitor protein  38.93 
 
 
297 aa  172  5.999999999999999e-42  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.18075 
 
 
-
 
NC_008061  Bcen_5123  chromosome replication initiation inhibitor protein  38.93 
 
 
297 aa  172  5.999999999999999e-42  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2012  chromosome replication initiation inhibitor protein  41.97 
 
 
298 aa  172  7.999999999999999e-42  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2085  chromosome replication initiation inhibitor protein  37 
 
 
299 aa  172  9e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21240  transcriptional regulator, ArgP family  42.12 
 
 
300 aa  171  2e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.100515 
 
 
-
 
NC_007951  Bxe_A2670  chromosome replication initiation inhibitor protein  39.05 
 
 
310 aa  169  5e-41  Burkholderia xenovorans LB400  Bacteria  normal  0.265415  normal 
 
 
-
 
NC_010622  Bphy_1829  chromosome replication initiation inhibitor protein  38.13 
 
 
297 aa  169  6e-41  Burkholderia phymatum STM815  Bacteria  normal  0.999172  hitchhiker  0.00188164 
 
 
-
 
NC_009007  RSP_3862  chromosome replication initiation inhibitor protein  40.21 
 
 
299 aa  169  7e-41  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2974  chromosome replication initiation inhibitor protein  38.03 
 
 
303 aa  169  8e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4012  transcriptional regulator, LysR family  41.04 
 
 
284 aa  169  8e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.725863 
 
 
-
 
NC_007951  Bxe_A1745  chromosome replication initiation inhibitor protein  37.27 
 
 
317 aa  168  8e-41  Burkholderia xenovorans LB400  Bacteria  normal  0.307823  normal  0.718712 
 
 
-
 
NC_013174  Jden_0158  transcriptional regulator, ArgP, LysR family  40.23 
 
 
292 aa  168  1e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_008686  Pden_1904  chromosome replication initiation inhibitor protein  37.55 
 
 
289 aa  166  2.9999999999999998e-40  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.188746 
 
 
-
 
NC_009656  PSPA7_4934  chromosome replication initiation inhibitor protein  39.07 
 
 
298 aa  167  2.9999999999999998e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_013530  Xcel_2242  transcriptional regulator, LysR family  41.82 
 
 
292 aa  166  4e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.124201  n/a   
 
 
-
 
NC_011094  SeSA_A3237  chromosome replication initiation inhibitor protein  40.07 
 
 
297 aa  164  2.0000000000000002e-39  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3302  chromosome replication initiation inhibitor protein  40.07 
 
 
297 aa  164  2.0000000000000002e-39  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.779303  normal 
 
 
-
 
NC_011886  Achl_0269  chromosome replication initiation inhibitor protein  38.97 
 
 
315 aa  164  2.0000000000000002e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.875741 
 
 
-
 
NC_011083  SeHA_C3299  chromosome replication initiation inhibitor protein  40.07 
 
 
297 aa  164  2.0000000000000002e-39  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.335083  normal 
 
 
-
 
NC_010681  Bphyt_1507  chromosome replication initiation inhibitor protein  37.86 
 
 
297 aa  164  2.0000000000000002e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3225  chromosome replication initiation inhibitor protein  40.07 
 
 
297 aa  164  2.0000000000000002e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0441076  n/a   
 
 
-
 
NC_010676  Bphyt_6516  chromosome replication initiation inhibitor protein  36.9 
 
 
310 aa  163  3e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3404  chromosome replication initiation inhibitor protein  40.07 
 
 
297 aa  163  4.0000000000000004e-39  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.269089  normal  0.216257 
 
 
-
 
NC_007951  Bxe_A2962  chromosome replication initiation inhibitor protein  37.5 
 
 
297 aa  163  4.0000000000000004e-39  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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