More than 300 homologs were found in PanDaTox collection
for query gene Jden_0158 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0158  transcriptional regulator, ArgP, LysR family  100 
 
 
292 aa  585  1e-166  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_013530  Xcel_2242  transcriptional regulator, LysR family  54.55 
 
 
292 aa  278  1e-73  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.124201  n/a   
 
 
-
 
NC_012669  Bcav_1650  chromosome replication initiation inhibitor protein  50.85 
 
 
298 aa  259  4e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.216692  normal  0.124746 
 
 
-
 
NC_013521  Sked_21240  transcriptional regulator, ArgP family  50.53 
 
 
300 aa  251  1e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.100515 
 
 
-
 
NC_013947  Snas_3409  transcriptional regulator ArgP, LysR family  47.64 
 
 
299 aa  246  4e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.305012  normal  0.0118196 
 
 
-
 
NC_014151  Cfla_3485  transcriptional regulator, ArgP, LysR family  50 
 
 
299 aa  241  9e-63  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.493863 
 
 
-
 
NC_013757  Gobs_0665  transcriptional regulator, LysR family  45.55 
 
 
299 aa  236  2e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.409403  n/a   
 
 
-
 
NC_009953  Sare_3123  chromosome replication initiation inhibitor protein  45.97 
 
 
298 aa  236  5.0000000000000005e-61  Salinispora arenicola CNS-205  Bacteria  normal  0.714101  hitchhiker  0.0033883 
 
 
-
 
NC_009664  Krad_4012  transcriptional regulator, LysR family  46.24 
 
 
284 aa  233  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.725863 
 
 
-
 
NC_008700  Sama_2987  chromosome replication initiation inhibitor protein  41.41 
 
 
299 aa  222  4.9999999999999996e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3749  transcriptional regulator, ArgP, LysR family  45.02 
 
 
303 aa  219  3.9999999999999997e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0393  chromosome replication initiation inhibitor protein  45.93 
 
 
293 aa  215  7e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1175  chromosome replication initiation inhibitor protein  44.3 
 
 
297 aa  214  9.999999999999999e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.578075  normal 
 
 
-
 
NC_009338  Mflv_0362  chromosome replication initiation inhibitor protein  44.81 
 
 
289 aa  213  3.9999999999999995e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0453473 
 
 
-
 
NC_008146  Mmcs_0354  chromosome replication initiation inhibitor protein  42.76 
 
 
304 aa  212  5.999999999999999e-54  Mycobacterium sp. MCS  Bacteria  normal  0.757564  n/a   
 
 
-
 
NC_008705  Mkms_0364  chromosome replication initiation inhibitor protein  42.76 
 
 
304 aa  212  5.999999999999999e-54  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2384  transcriptional regulator, ArgP, LysR family  44.48 
 
 
298 aa  211  1e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.758933 
 
 
-
 
NC_013441  Gbro_4638  transcriptional regulator, ArgP family  41.41 
 
 
302 aa  211  1e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.199138  n/a   
 
 
-
 
NC_010506  Swoo_2173  chromosome replication initiation inhibitor protein  40.27 
 
 
297 aa  211  1e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.342879  normal 
 
 
-
 
NC_010524  Lcho_0982  LysR family transcriptional regulator  43.71 
 
 
300 aa  209  3e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009092  Shew_1844  chromosome replication initiation inhibitor protein  41.16 
 
 
295 aa  209  4e-53  Shewanella loihica PV-4  Bacteria  normal  0.225634  normal  0.103464 
 
 
-
 
NC_009077  Mjls_0343  chromosome replication initiation inhibitor protein  41.75 
 
 
304 aa  207  2e-52  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0269  chromosome replication initiation inhibitor protein  41.5 
 
 
315 aa  206  3e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.875741 
 
 
-
 
NC_011071  Smal_1085  chromosome replication initiation inhibitor protein  39.93 
 
 
301 aa  205  6e-52  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0282228  normal 
 
 
-
 
NC_009831  Ssed_2434  chromosome replication initiation inhibitor protein  38.91 
 
 
295 aa  204  1e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  0.609977  hitchhiker  0.000411507 
 
 
-
 
NC_008699  Noca_4431  chromosome replication initiation inhibitor protein  44.59 
 
 
293 aa  203  3e-51  Nocardioides sp. JS614  Bacteria  normal  0.615047  n/a   
 
 
-
 
NC_008726  Mvan_0375  chromosome replication initiation inhibitor protein  41.78 
 
 
289 aa  202  5e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.868101 
 
 
-
 
NC_013093  Amir_5075  chromosome replication initiation inhibitor protein  43.66 
 
 
288 aa  199  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2144  chromosome replication initiation inhibitor protein  40.47 
 
 
297 aa  198  7.999999999999999e-50  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.184842 
 
 
-
 
NC_009997  Sbal195_2671  chromosome replication initiation inhibitor protein  38.76 
 
 
311 aa  198  7.999999999999999e-50  Shewanella baltica OS195  Bacteria  decreased coverage  0.000215658  normal 
 
 
-
 
NC_009438  Sputcn32_1698  chromosome replication initiation inhibitor protein  39.07 
 
 
309 aa  198  9e-50  Shewanella putrefaciens CN-32  Bacteria  normal  0.52148  n/a   
 
 
-
 
NC_013169  Ksed_11860  transcriptional regulator, ArgP family  40.8 
 
 
313 aa  197  1.0000000000000001e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0109539  normal 
 
 
-
 
NC_011663  Sbal223_1788  chromosome replication initiation inhibitor protein  38.76 
 
 
311 aa  197  1.0000000000000001e-49  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000000405332  unclonable  0.00000000000392786 
 
 
-
 
NC_014158  Tpau_0195  transcriptional regulator, ArgP, LysR family  42.18 
 
 
297 aa  198  1.0000000000000001e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2416  chromosome replication initiation inhibitor protein  39.27 
 
 
305 aa  197  1.0000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  0.343193  hitchhiker  0.00112785 
 
 
-
 
NC_004347  SO_2866  chromosome replication initiation inhibitor protein  39.07 
 
 
306 aa  197  2.0000000000000003e-49  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2344  chromosome replication initiation inhibitor protein  39.27 
 
 
305 aa  197  2.0000000000000003e-49  Shewanella sp. MR-4  Bacteria  normal  0.0367629  hitchhiker  0.0000000918792 
 
 
-
 
NC_008577  Shewana3_1652  chromosome replication initiation inhibitor protein  39.27 
 
 
305 aa  197  2.0000000000000003e-49  Shewanella sp. ANA-3  Bacteria  normal  0.963239  normal 
 
 
-
 
NC_009665  Shew185_2594  chromosome replication initiation inhibitor protein  38.44 
 
 
311 aa  196  3e-49  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000186754  n/a   
 
 
-
 
NC_009075  BURPS668_A0050  chromosome replication initiation inhibitor protein  39.53 
 
 
297 aa  196  5.000000000000001e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0034  chromosome replication initiation inhibitor protein  39.27 
 
 
297 aa  195  7e-49  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0036  chromosome replication initiation inhibitor protein  38.64 
 
 
297 aa  195  9e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1891  chromosome replication initiation inhibitor protein  40.48 
 
 
306 aa  194  1e-48  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2509  chromosome replication initiation inhibitor protein  41.22 
 
 
303 aa  194  1e-48  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3162  chromosome replication initiation inhibitor protein  41.44 
 
 
303 aa  194  2e-48  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5932  chromosome replication initiation inhibitor protein  40.38 
 
 
315 aa  194  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112757 
 
 
-
 
NC_009052  Sbal_2556  chromosome replication initiation inhibitor protein  38.44 
 
 
311 aa  194  2e-48  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000319404  n/a   
 
 
-
 
NC_010681  Bphyt_1507  chromosome replication initiation inhibitor protein  39.64 
 
 
297 aa  192  4e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12016  chromosome replication initiation inhibitor protein  41.11 
 
 
303 aa  192  5e-48  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4164  chromosome replication initiation inhibitor protein  39.26 
 
 
299 aa  192  5e-48  Sinorhizobium medicae WSM419  Bacteria  normal  0.221393  normal  0.317315 
 
 
-
 
NC_008751  Dvul_2358  chromosome replication initiation inhibitor protein  43.32 
 
 
302 aa  192  7e-48  Desulfovibrio vulgaris DP4  Bacteria  normal  0.17613  normal  0.155084 
 
 
-
 
NC_009079  BMA10247_A0036  chromosome replication initiation inhibitor protein  38.51 
 
 
297 aa  191  8e-48  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0030  chromosome replication initiation inhibitor protein  38.51 
 
 
297 aa  191  8e-48  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1183  chromosome replication initiation inhibitor protein  38.51 
 
 
297 aa  191  8e-48  Burkholderia mallei SAVP1  Bacteria  normal  0.893969  n/a   
 
 
-
 
NC_008835  BMA10229_1463  chromosome replication initiation inhibitor protein  38.51 
 
 
297 aa  191  8e-48  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2085  chromosome replication initiation inhibitor protein  36.18 
 
 
299 aa  191  9e-48  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1829  chromosome replication initiation inhibitor protein  39.13 
 
 
297 aa  191  1e-47  Burkholderia phymatum STM815  Bacteria  normal  0.999172  hitchhiker  0.00188164 
 
 
-
 
NC_007435  BURPS1710b_A1538  chromosome replication initiation inhibitor protein  37.63 
 
 
297 aa  191  1e-47  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2388  chromosome replication initiation inhibitor protein  39.39 
 
 
297 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00311135  hitchhiker  0.00401295 
 
 
-
 
NC_007951  Bxe_A2962  chromosome replication initiation inhibitor protein  39.13 
 
 
297 aa  191  1e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1399  chromosome replication initiation inhibitor protein  40.28 
 
 
300 aa  189  2.9999999999999997e-47  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5298  chromosome replication initiation inhibitor protein  38.27 
 
 
297 aa  189  5.999999999999999e-47  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2146  chromosome replication initiation inhibitor protein  38.83 
 
 
323 aa  189  7e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3312  chromosome replication initiation inhibitor protein  40.14 
 
 
301 aa  187  2e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.028913  normal  0.162228 
 
 
-
 
NC_009075  BURPS668_A0429  chromosome replication initiation inhibitor protein  38.49 
 
 
325 aa  187  2e-46  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3099  transcriptional regulator LysR family  39.33 
 
 
301 aa  186  4e-46  Agrobacterium vitis S4  Bacteria  normal  0.109242  n/a   
 
 
-
 
NC_010002  Daci_2836  chromosome replication initiation inhibitor protein  39.6 
 
 
301 aa  186  4e-46  Delftia acidovorans SPH-1  Bacteria  normal  0.284111  normal  0.240548 
 
 
-
 
NC_010515  Bcenmc03_4487  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5123  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5736  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  184  1.0000000000000001e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.18075 
 
 
-
 
NC_008391  Bamb_5007  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  183  2.0000000000000003e-45  Burkholderia ambifaria AMMD  Bacteria  normal  0.633447  normal 
 
 
-
 
NC_009078  BURPS1106A_A0336  chromosome replication initiation inhibitor protein  37.8 
 
 
325 aa  183  3e-45  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1772  chromosome replication initiation inhibitor protein  37.8 
 
 
325 aa  183  3e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  0.188561  n/a   
 
 
-
 
NC_007511  Bcep18194_B0180  chromosome replication initiation inhibitor protein  38.14 
 
 
301 aa  183  3e-45  Burkholderia sp. 383  Bacteria  normal  normal  0.240236 
 
 
-
 
NC_008061  Bcen_5388  chromosome replication initiation inhibitor protein  38.49 
 
 
301 aa  183  3e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4796  chromosome replication initiation inhibitor protein  38.49 
 
 
301 aa  183  3e-45  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.43549  normal 
 
 
-
 
NC_008543  Bcen2424_5473  chromosome replication initiation inhibitor protein  38.49 
 
 
301 aa  183  3e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.259043  normal  0.391167 
 
 
-
 
NC_008752  Aave_0132  chromosome replication initiation inhibitor protein  40.78 
 
 
305 aa  183  3e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.350257 
 
 
-
 
NC_009668  Oant_2974  chromosome replication initiation inhibitor protein  37.71 
 
 
303 aa  183  4.0000000000000006e-45  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1833  chromosome replication initiation inhibitor protein  37.8 
 
 
325 aa  182  5.0000000000000004e-45  Burkholderia mallei ATCC 23344  Bacteria  normal  0.565601  n/a   
 
 
-
 
NC_008784  BMASAVP1_0835  chromosome replication initiation inhibitor protein  37.8 
 
 
319 aa  182  5.0000000000000004e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.0738995  n/a   
 
 
-
 
NC_009079  BMA10247_A2099  chromosome replication initiation inhibitor protein  37.8 
 
 
325 aa  182  5.0000000000000004e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1126  chromosome replication initiation inhibitor protein  37.8 
 
 
325 aa  182  5.0000000000000004e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0698805  n/a   
 
 
-
 
NC_010552  BamMC406_3148  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  182  6e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.99123  normal 
 
 
-
 
NC_008825  Mpe_A3518  chromosome replication initiation inhibitor protein  40.75 
 
 
312 aa  182  8.000000000000001e-45  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0711  chromosome replication initiation inhibitor protein  42.16 
 
 
308 aa  181  1e-44  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1573  chromosome replication initiation inhibitor protein  40.58 
 
 
318 aa  180  2e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  0.187685  normal 
 
 
-
 
NC_007511  Bcep18194_B3139  chromosome replication initiation inhibitor protein  36 
 
 
297 aa  179  4e-44  Burkholderia sp. 383  Bacteria  normal  0.677329  normal 
 
 
-
 
NC_010552  BamMC406_5362  chromosome replication initiation inhibitor protein  37.8 
 
 
301 aa  179  4e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  0.217291  normal 
 
 
-
 
NC_008391  Bamb_4815  chromosome replication initiation inhibitor protein  37.46 
 
 
301 aa  179  5.999999999999999e-44  Burkholderia ambifaria AMMD  Bacteria  normal  0.173708  normal 
 
 
-
 
NC_008782  Ajs_0072  chromosome replication initiation inhibitor protein  38.38 
 
 
303 aa  178  7e-44  Acidovorax sp. JS42  Bacteria  normal  0.608118  normal 
 
 
-
 
NC_007519  Dde_3474  chromosome replication initiation inhibitor protein  37.7 
 
 
316 aa  178  7e-44  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0091  chromosome replication initiation inhibitor protein  38.38 
 
 
303 aa  178  7e-44  Acidovorax ebreus TPSY  Bacteria  normal  0.730131  n/a   
 
 
-
 
NC_009007  RSP_3862  chromosome replication initiation inhibitor protein  38.1 
 
 
299 aa  178  1e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4249  chromosome replication initiation inhibitor protein  40.28 
 
 
298 aa  177  2e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.373423  normal  0.150215 
 
 
-
 
NC_009901  Spea_1974  chromosome replication initiation inhibitor protein  36.3 
 
 
296 aa  177  2e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0576454  n/a   
 
 
-
 
NC_007348  Reut_B3693  chromosome replication initiation inhibitor protein  41.61 
 
 
306 aa  175  7e-43  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0947  chromosome replication initiation inhibitor protein  40.66 
 
 
311 aa  174  9.999999999999999e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007963  Csal_2433  chromosome replication initiation inhibitor protein  36.46 
 
 
302 aa  174  9.999999999999999e-43  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3863  chromosome replication initiation inhibitor protein  41.32 
 
 
298 aa  174  1.9999999999999998e-42  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.807931 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>