Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2242 |
Symbol | |
ID | 8649776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2422031 |
End bp | 2422909 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003326818 |
Protein GI | 269957029 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.124201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCTCG CCCAGCTCGA AGCGCTCGTC GCCGTCGTCG ACGAAGGATC CTTCGACGCC GCCGCCCGGC TGCTGCACGT GACGCCGTCG GCGGTCAGCC AACGGATCAA GGCACTCGAG ACCTCCGCCG GCACGGTGCT GCTGCGGCGG TCGCGGCCGG TCGTCGCGAC CGCCGCCGGC GTCGACGTCC TGCGGTCGGC GCGGCAGGTG CTCGCCGTCG TGCGCGAGAC CGGGCTGCCG CGTCCGCGCA GCACCGCCGG GACCCTGCCG CTCGTGCCGA TCGCCGTCAA CGGCGACTCG CTGCACACGT GGGCGCTGCC CGCCCTGGCC GCCGTCGGGC ACCTCGCCGT CTTCGACGTG CACCGCGAGG ACCAGGACCA CTCGGCCGAG CTGCTGCGCC AGGGCGAGGT CATGGCCGCC GTGACCACGC AGGCCACCCC CGTGCAGGGG TGCGTGGCGG TGCGCCTCGG GGTGATGCGG TACCGCCCGT TCGCGACGCC CGGATTCGTC GCACGATGGT TCCCCGACGG GGTGACCGCC GAGGCGCTCG CGGTGGCACC CGTGATGATG TTCGATCGCA AGGACGACCT GCAGGACCGG TACCTGCGCG CCCGGGGCGG CGCGGACGCC GCCCCGCCGC GGCACTACGT CCCGTCGTCG GACGACTTCG GGCGCGCCGT CCGGCTCGGG CTCGGCTGGG GCCTGCTGCC CGCCGAGGAC TCCGCGGCCG CCGAGGCGGC CGGGAACCTG GTCGACCTCG ACCCCGGCGA GCACGTGGAC GTCGAGCTGC ACTGGCAGCA GTGGTCGCTG CGCACACCGG TGCTCGACGC CGTCGCGGCG GCGGTCCGGG CAGCCGCGCG GGACGCCCTG CTGCCCTGA
|
Protein sequence | MELAQLEALV AVVDEGSFDA AARLLHVTPS AVSQRIKALE TSAGTVLLRR SRPVVATAAG VDVLRSARQV LAVVRETGLP RPRSTAGTLP LVPIAVNGDS LHTWALPALA AVGHLAVFDV HREDQDHSAE LLRQGEVMAA VTTQATPVQG CVAVRLGVMR YRPFATPGFV ARWFPDGVTA EALAVAPVMM FDRKDDLQDR YLRARGGADA APPRHYVPSS DDFGRAVRLG LGWGLLPAED SAAAEAAGNL VDLDPGEHVD VELHWQQWSL RTPVLDAVAA AVRAAARDAL LP
|
| |