Gene Smed_4164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4164 
Symbol 
ID5319193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp639077 
End bp639976 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID640775969 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_001312902 
Protein GI150376306 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.317315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT ACTCCGCTCT CCGCGCCGTC TCGGCGGTCG TTCAGACCGG CAGCTTCGAA 
AAGGCTGCCG GCCTTCTCAA CGTGACGCCT TCGGCCGTAT CGCAGCGGGT GAAGCAGTTT
GAGGAACGTC TCGGCGTGGT GCTGATTGCG AGAGGCAATC CCTGCACCGC GACCGAGAAA
GGAGAGTGGC TCTGCCGGCA CATGGAGAAT GTCGGCATGC TTGAAGCCGA GCTGTTCCAG
CATCTGCCCG ATCTCCTCGA TCCGACGGAT CCCGAACCAA GAGTAACTCT GCACATCGCG
ACGAATGCCG ACAGTCTCGG AACATGGTTC CTGACGGCAA TGTCGAGCTT CGCCAGGCAC
TCTCCCTATC TGCTCAACAT TGCGATCGAC GACGAGGACC ATACCGCCGA ATGGCTCCGG
CGCGGGCGTG TGGTCGCCGC GGTCACCAGC CTGGAAAAGC CGGTTCAGGG CTGCCGCCGG
CTTTTCCTCG GCGCGCTGCG CTATCACGCC ACTGCGAGCC CCGATTTCGT CGCCCGCCAT
TTTCCGCAGG GTGTCACGGC AAATTCCATC GGCAGAGCGC CGGCCTTGAC CTTCAATCAG
AAGGACAGGC TCCAGTGCCG GTGGATCCGT CAGGTGTTCG AGGAAGACGC CAATCCTGCG
ACGCATTGGC TGCCCTCGAC CCCGGGTTTC ATCGAGGCCA GCCTTTCCGG CATGGGATGG
GGCATGAATC CGGCACCACT CGTGCGCGAG CACCTCAGCT CCGGGCGGCT GGTGGAACTG
ATCCCGGAAA CGCCTTTGGA CGTTCCGCTC TATTGGCAGC TGAACCGACT TGCCGCCGAC
CGCCTGGCGG AGCTGACTCG CGAGGTCACG ACCGCGGCCA GGCATCACTT GTTGGGGTGA
 
Protein sequence
MLDYSALRAV SAVVQTGSFE KAAGLLNVTP SAVSQRVKQF EERLGVVLIA RGNPCTATEK 
GEWLCRHMEN VGMLEAELFQ HLPDLLDPTD PEPRVTLHIA TNADSLGTWF LTAMSSFARH
SPYLLNIAID DEDHTAEWLR RGRVVAAVTS LEKPVQGCRR LFLGALRYHA TASPDFVARH
FPQGVTANSI GRAPALTFNQ KDRLQCRWIR QVFEEDANPA THWLPSTPGF IEASLSGMGW
GMNPAPLVRE HLSSGRLVEL IPETPLDVPL YWQLNRLAAD RLAELTREVT TAARHHLLG