Gene BamMC406_5362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5362 
Symbol 
ID6179319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2593680 
End bp2594585 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID641685117 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_001812022 
Protein GI172064371 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.217291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGA CGATCGATCC GAAGCAAGCC GCCGCGCTGC TGGCCGTCGC CGACACCGGC 
AGCTTCGAGC AGGCCGCCGT GCGCCTGCAC GTGACCGCAT CCGCCGTCAC GCAGCGGGTC
CGCGCGCTGG AGGCGAGCCT CGGCACGCCG CTCGTGCTAC GCACGCGGCC GTGCCGCCCG
ACGGTGGCCG GGCAGCGCGT GCTGCAGCAC CTGCGCCGCG TCGCGCTGCT GCAGGCCGAC
CTGCAAAGCA CGCTCGCGGC CGAGCGCGAA TCGCCGATCT CCGTCACGAT CGCGCTGAAT
TCCGACAGCC TCGGCACCTG GTTCCTGCCC GCACTGACTT CGGTGCTCGC GGGCGAGCGC
ATCCTGTTCG AGCTGATCGT CGAGGACCAG GACCACACGT TCGCGCTGCT CGAAAGCGGG
ATGGCCGTCG GCTGCGTGAC GACCGAGCCG AAACCGATGC GCGGCTGCGT CGCGACGCCG
CTCGGCACGA TGCGCTACCG CCTGCTCGCA GCCGCCGCGT TCGCGGGGCG CTGGTTTCCG
CGCGGCCTGA ACCGCACGAG CGCGCGCGAT GCGCCGGTCG TCGCGTATTC GCGGCGCGAC
ACGCTGCAGT CCACGTTCCT GAAGGAGAAG TTCGGGTTGC CCGAAGGCGC GTATCCATGC
CACTACGTGC CGGGCACGCA CGCGCATTTC GCGGCGGTGC GGCACGGGCT CGGCTACGCG
ATGGTGCCGG AGCCGCTGCT CGGCGGCGCA CCGCTCGATG AGCAAGGGCT CGTCGATCTC
GCGCCCATGC ATCCGACCGA CGTGACGCTG TACTGGCACG CGTGGACGGT GCAGTCGCCG
ACGATGGCGT CGCTGTCCGC ACGGGTGGTC GAAGCGGCGC GCCGGTTGCT CGCGCCGCTG
CCGTGA
 
Protein sequence
MSLTIDPKQA AALLAVADTG SFEQAAVRLH VTASAVTQRV RALEASLGTP LVLRTRPCRP 
TVAGQRVLQH LRRVALLQAD LQSTLAAERE SPISVTIALN SDSLGTWFLP ALTSVLAGER
ILFELIVEDQ DHTFALLESG MAVGCVTTEP KPMRGCVATP LGTMRYRLLA AAAFAGRWFP
RGLNRTSARD APVVAYSRRD TLQSTFLKEK FGLPEGAYPC HYVPGTHAHF AAVRHGLGYA
MVPEPLLGGA PLDEQGLVDL APMHPTDVTL YWHAWTVQSP TMASLSARVV EAARRLLAPL
P