| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0982 |
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| Symbol | |
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| ID | 6161995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1049907 |
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| End bp | 1050809 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663732 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001790018 |
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| Protein GI | 171057669 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03298] transcriptional regulator, ArgP family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTGG ACCTCCAAGC CTTGCGCGCA CTGGCCGCGG TCCTGCGGGA AGGCAGCTTC
GAACGCGCCG CCCGGCAGAT GCATGTCACG CCGTCGGCGG TGTCGCAGCG CATCCGCGCG
CTCGAAGAGC GCCTGGGCTG CGTGCTGCTG GTGCGCACCT CGCCCGTCAC CGCCACCGAA
GAAGGCGCGC GGCTCTATTT GCATTTTTTG CAGATCGAGG TGCTCGAGGC CGATCTGGCG
CGCGATCTGC AGCCGCTCGG TGATGCCGCC TCGCGGCGTG GTCGCAGCAT CCGGGTGGCG
GTCAACGCCG ACAGCCTGGC GACCTGGGTG ATCCCGGCGC TGGCCGATTT CCATGCCCGC
AGCGGCGACA CGGTGGCGCT GCACGTCGAC GATCAGGACC ACACCCGCGA GTGGCTGCGC
TCGGGCACGG TGTTCGCCGC GGTGACGGCG GCGTCGGAGC CGGTGGCCGG CTGCAGGGTC
GACCCGCTCG GCTCGATGCG CTACTGCGCC GCCGCCAGCC CCGAGTTCGC GAAACGCTAT
TTCGAAGCGC GCGATCTGCA GGCCGCATTC AGCGAGGCGC CGATGCTGGT CTTCAATCAG
AAGGATCAGC TCCAGCACCG GTTCCTGAAC GAGCTGCTGG GGGATGCCGA TCCGCACCCG
CCGGTCTGGT GGCTGCCGTC GACGCATGCG TTTCTCGACG CCGCCCGCGC CGGCCTGGGC
TGGGGCCTGC ACCCGCTGCC GCTGGTGGCC GACGATCTGG CCAGCGGCCG GCTGGTCGAC
CTGAGCCCCG GCCACAGCCT GGACGTGCCG CTGTTCTGGC AGAGCTGGCG GCTCGACTCC
GAAACCGTGC ACACGCTGCG CAGCTGCATG CTGCGCGCGG CCGAGGGCGC CTTGCTGCAG
TGA
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| Protein sequence | MMLDLQALRA LAAVLREGSF ERAARQMHVT PSAVSQRIRA LEERLGCVLL VRTSPVTATE
EGARLYLHFL QIEVLEADLA RDLQPLGDAA SRRGRSIRVA VNADSLATWV IPALADFHAR
SGDTVALHVD DQDHTREWLR SGTVFAAVTA ASEPVAGCRV DPLGSMRYCA AASPEFAKRY
FEARDLQAAF SEAPMLVFNQ KDQLQHRFLN ELLGDADPHP PVWWLPSTHA FLDAARAGLG
WGLHPLPLVA DDLASGRLVD LSPGHSLDVP LFWQSWRLDS ETVHTLRSCM LRAAEGALLQ
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