Gene TM1040_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1891 
Symbol 
ID4077388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1992084 
End bp1993004 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID638007207 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_613886 
Protein GI99081732 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACG ATCCCCTTCA ACTGGCGGCT CTTTCGGCGG TGCTCGACCT TGGCAGCTTT 
GATGCGGCCT CGGCGGCGCT TGGGGTGACA CCCTCGGCGA TCTCACAGCG GATCAAGGCG
CTGGAGGATC GCATCGGCAC GCCCCTCGTC AATCGCTCAA GCCCTTGCAC TGGCACAGAA
ACCGGGCTTC GGATTGCCAA ACATGCAGAG GATGTCGCGC TCCTTGAGCG TCGCCTTAGC
CGGGACTTGT CGCTCGAGGG CGCCGAAACA CCCGCGCGGC TCAAGCTGGC GGTCAATGCG
GACAGTCTTG CGACCTGGTT TGTCGAGGCG ATGGTAGCGG CGGGGGATGT GCTGTTTGAT
CTTGTGATCG ACGATCAGGA CCACAGCACC GACTGGCTGC GCCGCGGGGT GGTCTCGGCG
GCGGTCAGCG CCGAGCCGCG TCCGGTTGCG GGCTGCGATG TGCATGCGCT TGGGCATCTG
CGCTATGTCG CAACGGCCAG CCCCGCCTAT ATGGCGCGCT GGTTTCCGGG TGGCGTGACG
CCAGAGACCG CAAGCGTCGC GCCCTGCATG GTGTTCAACG CAAAGGATCG GCTGCAACAC
CGCTGGCTTG CGCGCCATGT CGCCCCCGGC CTCACACCGC CCTCACATGC GTTGTCATCG
ACGCAGGCCT TTCTCGATGC GGCGGCCGCG GGGCTCGGCT GGGGCATGAA CCCCGAGACA
CTGGCCGAAC CGCATCTGGC CTCTGGTGCC CTGGTCGAAC TGATCCCACA GAGCCCGCTT
GAAACACCAC TCTATTGGCA TGTGAGTCGG ATCATGGCCC CCGCGCTTGT AGAGATCACC
CAAGCCGTGC GCCGTGCTGC CAGCGCCAAT CTGCATCCGC CCCCAAAGGC CTCCAACGCG
CGTGCTGGCC GTGGCGGGTG A
 
Protein sequence
MRYDPLQLAA LSAVLDLGSF DAASAALGVT PSAISQRIKA LEDRIGTPLV NRSSPCTGTE 
TGLRIAKHAE DVALLERRLS RDLSLEGAET PARLKLAVNA DSLATWFVEA MVAAGDVLFD
LVIDDQDHST DWLRRGVVSA AVSAEPRPVA GCDVHALGHL RYVATASPAY MARWFPGGVT
PETASVAPCM VFNAKDRLQH RWLARHVAPG LTPPSHALSS TQAFLDAAAA GLGWGMNPET
LAEPHLASGA LVELIPQSPL ETPLYWHVSR IMAPALVEIT QAVRRAASAN LHPPPKASNA
RAGRGG