More than 300 homologs were found in PanDaTox collection
for query gene TM1040_1891 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_1891  chromosome replication initiation inhibitor protein  100 
 
 
306 aa  612  9.999999999999999e-175  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0711  chromosome replication initiation inhibitor protein  60.26 
 
 
308 aa  331  8e-90  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3099  transcriptional regulator LysR family  55.97 
 
 
301 aa  305  7e-82  Agrobacterium vitis S4  Bacteria  normal  0.109242  n/a   
 
 
-
 
NC_009668  Oant_2974  chromosome replication initiation inhibitor protein  48.12 
 
 
303 aa  275  9e-73  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1904  chromosome replication initiation inhibitor protein  53.5 
 
 
289 aa  274  1.0000000000000001e-72  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.188746 
 
 
-
 
NC_011369  Rleg2_2144  chromosome replication initiation inhibitor protein  48.45 
 
 
297 aa  272  4.0000000000000004e-72  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.184842 
 
 
-
 
NC_012850  Rleg_2388  chromosome replication initiation inhibitor protein  47.42 
 
 
297 aa  266  2.9999999999999995e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00311135  hitchhiker  0.00401295 
 
 
-
 
NC_009620  Smed_4164  chromosome replication initiation inhibitor protein  47.42 
 
 
299 aa  260  2e-68  Sinorhizobium medicae WSM419  Bacteria  normal  0.221393  normal  0.317315 
 
 
-
 
NC_007643  Rru_A0658  chromosome replication initiation inhibitor protein  45.97 
 
 
310 aa  259  5.0000000000000005e-68  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.117033  n/a   
 
 
-
 
NC_009007  RSP_3862  chromosome replication initiation inhibitor protein  51.71 
 
 
299 aa  256  4e-67  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4249  chromosome replication initiation inhibitor protein  51.43 
 
 
298 aa  254  1.0000000000000001e-66  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.373423  normal  0.150215 
 
 
-
 
NC_011992  Dtpsy_2509  chromosome replication initiation inhibitor protein  49.49 
 
 
303 aa  253  4.0000000000000004e-66  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3162  chromosome replication initiation inhibitor protein  49.49 
 
 
303 aa  252  5.000000000000001e-66  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3863  chromosome replication initiation inhibitor protein  50 
 
 
298 aa  250  2e-65  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.807931 
 
 
-
 
NC_009040  Rsph17029_4178  chromosome replication initiation inhibitor protein  50.7 
 
 
299 aa  247  2e-64  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.257723  normal  0.264843 
 
 
-
 
NC_010002  Daci_2836  chromosome replication initiation inhibitor protein  46.76 
 
 
301 aa  243  3e-63  Delftia acidovorans SPH-1  Bacteria  normal  0.284111  normal  0.240548 
 
 
-
 
NC_007348  Reut_B3693  chromosome replication initiation inhibitor protein  48.29 
 
 
306 aa  243  3e-63  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1704  chromosome replication initiation inhibitor protein  49.11 
 
 
298 aa  239  2.9999999999999997e-62  Ralstonia pickettii 12D  Bacteria  normal  0.305056  normal 
 
 
-
 
NC_007951  Bxe_A2962  chromosome replication initiation inhibitor protein  45.17 
 
 
297 aa  238  5.999999999999999e-62  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1573  chromosome replication initiation inhibitor protein  47.96 
 
 
318 aa  238  9e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  0.187685  normal 
 
 
-
 
NC_010682  Rpic_2012  chromosome replication initiation inhibitor protein  48.4 
 
 
298 aa  236  2e-61  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2774  chromosome replication initiation inhibitor protein  49.1 
 
 
295 aa  236  3e-61  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0354  chromosome replication initiation inhibitor protein  46.45 
 
 
304 aa  233  3e-60  Mycobacterium sp. MCS  Bacteria  normal  0.757564  n/a   
 
 
-
 
NC_008705  Mkms_0364  chromosome replication initiation inhibitor protein  46.45 
 
 
304 aa  233  3e-60  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0343  chromosome replication initiation inhibitor protein  45.74 
 
 
304 aa  232  5e-60  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1507  chromosome replication initiation inhibitor protein  44.14 
 
 
297 aa  232  7.000000000000001e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1829  chromosome replication initiation inhibitor protein  43.45 
 
 
297 aa  229  4e-59  Burkholderia phymatum STM815  Bacteria  normal  0.999172  hitchhiker  0.00188164 
 
 
-
 
NC_012791  Vapar_4371  chromosome replication initiation inhibitor protein  47.99 
 
 
305 aa  224  1e-57  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0034  chromosome replication initiation inhibitor protein  42.86 
 
 
297 aa  224  2e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1175  chromosome replication initiation inhibitor protein  46.21 
 
 
297 aa  224  2e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.578075  normal 
 
 
-
 
NC_009075  BURPS668_A0050  chromosome replication initiation inhibitor protein  42.41 
 
 
297 aa  223  3e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0036  chromosome replication initiation inhibitor protein  42.41 
 
 
297 aa  223  3e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2085  chromosome replication initiation inhibitor protein  42.51 
 
 
299 aa  223  4e-57  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0982  LysR family transcriptional regulator  45.82 
 
 
300 aa  223  4e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009565  TBFG_12016  chromosome replication initiation inhibitor protein  44.25 
 
 
303 aa  222  7e-57  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3409  transcriptional regulator ArgP, LysR family  42.47 
 
 
299 aa  220  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.305012  normal  0.0118196 
 
 
-
 
NC_010086  Bmul_5298  chromosome replication initiation inhibitor protein  42.76 
 
 
297 aa  221  1.9999999999999999e-56  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0030  chromosome replication initiation inhibitor protein  41.72 
 
 
297 aa  219  5e-56  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1538  chromosome replication initiation inhibitor protein  41.72 
 
 
297 aa  219  5e-56  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1399  chromosome replication initiation inhibitor protein  45.55 
 
 
300 aa  219  5e-56  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1183  chromosome replication initiation inhibitor protein  41.72 
 
 
297 aa  219  5e-56  Burkholderia mallei SAVP1  Bacteria  normal  0.893969  n/a   
 
 
-
 
NC_009079  BMA10247_A0036  chromosome replication initiation inhibitor protein  41.72 
 
 
297 aa  219  5e-56  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1463  chromosome replication initiation inhibitor protein  41.72 
 
 
297 aa  219  5e-56  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1085  chromosome replication initiation inhibitor protein  43.05 
 
 
301 aa  218  1e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0282228  normal 
 
 
-
 
NC_010515  Bcenmc03_4487  chromosome replication initiation inhibitor protein  41.03 
 
 
297 aa  216  2.9999999999999998e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5123  chromosome replication initiation inhibitor protein  41.03 
 
 
297 aa  216  2.9999999999999998e-55  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5736  chromosome replication initiation inhibitor protein  41.03 
 
 
297 aa  216  2.9999999999999998e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.18075 
 
 
-
 
NC_009338  Mflv_0362  chromosome replication initiation inhibitor protein  47.39 
 
 
289 aa  215  7e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0453473 
 
 
-
 
NC_008391  Bamb_5007  chromosome replication initiation inhibitor protein  41.38 
 
 
297 aa  215  9e-55  Burkholderia ambifaria AMMD  Bacteria  normal  0.633447  normal 
 
 
-
 
NC_002947  PP_0917  chromosome replication initiation inhibitor protein  42.91 
 
 
296 aa  214  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0983  chromosome replication initiation inhibitor protein  42.23 
 
 
296 aa  214  9.999999999999999e-55  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00028343 
 
 
-
 
NC_010552  BamMC406_3148  chromosome replication initiation inhibitor protein  41.38 
 
 
297 aa  214  1.9999999999999998e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  0.99123  normal 
 
 
-
 
NC_009512  Pput_0956  chromosome replication initiation inhibitor protein  42.91 
 
 
296 aa  214  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.480683  normal  0.474013 
 
 
-
 
NC_009439  Pmen_1116  chromosome replication initiation inhibitor protein  43.05 
 
 
297 aa  214  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.472937 
 
 
-
 
NC_008726  Mvan_0375  chromosome replication initiation inhibitor protein  44.14 
 
 
289 aa  213  3.9999999999999995e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.868101 
 
 
-
 
NC_007511  Bcep18194_B3139  chromosome replication initiation inhibitor protein  40.69 
 
 
297 aa  212  5.999999999999999e-54  Burkholderia sp. 383  Bacteria  normal  0.677329  normal 
 
 
-
 
NC_010322  PputGB1_4471  chromosome replication initiation inhibitor protein  42.23 
 
 
296 aa  212  5.999999999999999e-54  Pseudomonas putida GB-1  Bacteria  normal  normal  0.134322 
 
 
-
 
NC_009953  Sare_3123  chromosome replication initiation inhibitor protein  43.05 
 
 
298 aa  212  7.999999999999999e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.714101  hitchhiker  0.0033883 
 
 
-
 
NC_012669  Bcav_1650  chromosome replication initiation inhibitor protein  42.76 
 
 
298 aa  210  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.216692  normal  0.124746 
 
 
-
 
NC_010086  Bmul_3312  chromosome replication initiation inhibitor protein  41.72 
 
 
301 aa  208  1e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.028913  normal  0.162228 
 
 
-
 
NC_007492  Pfl01_4483  chromosome replication initiation inhibitor protein  41.02 
 
 
297 aa  204  2e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.111794 
 
 
-
 
NC_007511  Bcep18194_B0180  chromosome replication initiation inhibitor protein  40.2 
 
 
301 aa  201  9.999999999999999e-51  Burkholderia sp. 383  Bacteria  normal  normal  0.240236 
 
 
-
 
NC_009656  PSPA7_4934  chromosome replication initiation inhibitor protein  42.25 
 
 
298 aa  201  9.999999999999999e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_004578  PSPTO_4361  chromosome initiation inhibitor  40.47 
 
 
299 aa  201  1.9999999999999998e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4796  chromosome replication initiation inhibitor protein  40 
 
 
301 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.43549  normal 
 
 
-
 
NC_008061  Bcen_5388  chromosome replication initiation inhibitor protein  40 
 
 
301 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5473  chromosome replication initiation inhibitor protein  40 
 
 
301 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.259043  normal  0.391167 
 
 
-
 
NC_007005  Psyr_4057  chromosome replication initiation inhibitor protein  40.99 
 
 
299 aa  199  3.9999999999999996e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4815  chromosome replication initiation inhibitor protein  39.67 
 
 
301 aa  199  5e-50  Burkholderia ambifaria AMMD  Bacteria  normal  0.173708  normal 
 
 
-
 
NC_008463  PA14_56740  chromosome replication initiation inhibitor protein  41.9 
 
 
300 aa  198  9e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5362  chromosome replication initiation inhibitor protein  39.67 
 
 
301 aa  198  1.0000000000000001e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  0.217291  normal 
 
 
-
 
NC_007963  Csal_2433  chromosome replication initiation inhibitor protein  41.03 
 
 
302 aa  198  1.0000000000000001e-49  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2358  chromosome replication initiation inhibitor protein  39.38 
 
 
302 aa  197  2.0000000000000003e-49  Desulfovibrio vulgaris DP4  Bacteria  normal  0.17613  normal  0.155084 
 
 
-
 
NC_009831  Ssed_2434  chromosome replication initiation inhibitor protein  36.52 
 
 
295 aa  196  4.0000000000000005e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  0.609977  hitchhiker  0.000411507 
 
 
-
 
NC_013173  Dbac_3445  transcriptional regulator, ArgP, LysR family  37.88 
 
 
321 aa  196  6e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1974  chromosome replication initiation inhibitor protein  35.93 
 
 
296 aa  194  1e-48  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0576454  n/a   
 
 
-
 
NC_010506  Swoo_2173  chromosome replication initiation inhibitor protein  34.59 
 
 
297 aa  194  2e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.342879  normal 
 
 
-
 
NC_009092  Shew_1844  chromosome replication initiation inhibitor protein  38.23 
 
 
295 aa  193  2e-48  Shewanella loihica PV-4  Bacteria  normal  0.225634  normal  0.103464 
 
 
-
 
NC_011886  Achl_0269  chromosome replication initiation inhibitor protein  43.79 
 
 
315 aa  194  2e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.875741 
 
 
-
 
NC_013530  Xcel_2242  transcriptional regulator, LysR family  43.17 
 
 
292 aa  193  3e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.124201  n/a   
 
 
-
 
NC_008700  Sama_2987  chromosome replication initiation inhibitor protein  37.33 
 
 
299 aa  192  5e-48  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2146  chromosome replication initiation inhibitor protein  39.74 
 
 
323 aa  192  6e-48  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2384  transcriptional regulator, ArgP, LysR family  39.59 
 
 
298 aa  192  8e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.758933 
 
 
-
 
NC_011662  Tmz1t_3749  transcriptional regulator, ArgP, LysR family  39.86 
 
 
303 aa  190  2.9999999999999997e-47  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1337  chromosome replication initiation inhibitor protein  40.57 
 
 
290 aa  190  2.9999999999999997e-47  Marinobacter aquaeolei VT8  Bacteria  normal  0.449997  n/a   
 
 
-
 
NC_013093  Amir_5075  chromosome replication initiation inhibitor protein  42.11 
 
 
288 aa  189  5e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4431  chromosome replication initiation inhibitor protein  43.2 
 
 
293 aa  189  5e-47  Nocardioides sp. JS614  Bacteria  normal  0.615047  n/a   
 
 
-
 
NC_013174  Jden_0158  transcriptional regulator, ArgP, LysR family  40.48 
 
 
292 aa  189  7e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.804974 
 
 
-
 
NC_013757  Gobs_0665  transcriptional regulator, LysR family  40.73 
 
 
299 aa  188  1e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.409403  n/a   
 
 
-
 
NC_013131  Caci_5932  chromosome replication initiation inhibitor protein  39.02 
 
 
315 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112757 
 
 
-
 
NC_009438  Sputcn32_1698  chromosome replication initiation inhibitor protein  34.3 
 
 
309 aa  185  1.0000000000000001e-45  Shewanella putrefaciens CN-32  Bacteria  normal  0.52148  n/a   
 
 
-
 
NC_009075  BURPS668_A0429  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  184  2.0000000000000003e-45  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0336  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  184  2.0000000000000003e-45  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1772  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  184  2.0000000000000003e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  0.188561  n/a   
 
 
-
 
NC_008835  BMA10229_1126  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  183  3e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0698805  n/a   
 
 
-
 
NC_006349  BMAA1833  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  183  3e-45  Burkholderia mallei ATCC 23344  Bacteria  normal  0.565601  n/a   
 
 
-
 
NC_009079  BMA10247_A2099  chromosome replication initiation inhibitor protein  38.51 
 
 
325 aa  183  3e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0835  chromosome replication initiation inhibitor protein  38.51 
 
 
319 aa  183  3e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.0738995  n/a   
 
 
-
 
NC_008752  Aave_0132  chromosome replication initiation inhibitor protein  39.42 
 
 
305 aa  182  7e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.350257 
 
 
-
 
NC_004347  SO_2866  chromosome replication initiation inhibitor protein  34.67 
 
 
306 aa  181  1e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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