More than 300 homologs were found in PanDaTox collection
for query gene Ssed_2434 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_2434  chromosome replication initiation inhibitor protein  100 
 
 
295 aa  611  9.999999999999999e-175  Shewanella sediminis HAW-EB3  Bacteria  normal  0.609977  hitchhiker  0.000411507 
 
 
-
 
NC_010506  Swoo_2173  chromosome replication initiation inhibitor protein  89.49 
 
 
297 aa  566  1e-160  Shewanella woodyi ATCC 51908  Bacteria  normal  0.342879  normal 
 
 
-
 
NC_009092  Shew_1844  chromosome replication initiation inhibitor protein  78.23 
 
 
295 aa  487  1e-137  Shewanella loihica PV-4  Bacteria  normal  0.225634  normal  0.103464 
 
 
-
 
NC_009052  Sbal_2556  chromosome replication initiation inhibitor protein  73.05 
 
 
311 aa  474  1e-132  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000319404  n/a   
 
 
-
 
NC_011663  Sbal223_1788  chromosome replication initiation inhibitor protein  72.73 
 
 
311 aa  471  1e-132  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000000405332  unclonable  0.00000000000392786 
 
 
-
 
NC_009997  Sbal195_2671  chromosome replication initiation inhibitor protein  72.4 
 
 
311 aa  470  1.0000000000000001e-131  Shewanella baltica OS195  Bacteria  decreased coverage  0.000215658  normal 
 
 
-
 
NC_009665  Shew185_2594  chromosome replication initiation inhibitor protein  72.08 
 
 
311 aa  467  1.0000000000000001e-131  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000186754  n/a   
 
 
-
 
NC_004347  SO_2866  chromosome replication initiation inhibitor protein  72.61 
 
 
306 aa  466  9.999999999999999e-131  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2344  chromosome replication initiation inhibitor protein  72.28 
 
 
305 aa  464  9.999999999999999e-131  Shewanella sp. MR-4  Bacteria  normal  0.0367629  hitchhiker  0.0000000918792 
 
 
-
 
NC_008322  Shewmr7_2416  chromosome replication initiation inhibitor protein  72.28 
 
 
305 aa  464  9.999999999999999e-131  Shewanella sp. MR-7  Bacteria  normal  0.343193  hitchhiker  0.00112785 
 
 
-
 
NC_008577  Shewana3_1652  chromosome replication initiation inhibitor protein  72.28 
 
 
305 aa  464  9.999999999999999e-131  Shewanella sp. ANA-3  Bacteria  normal  0.963239  normal 
 
 
-
 
NC_009438  Sputcn32_1698  chromosome replication initiation inhibitor protein  72.46 
 
 
309 aa  463  1e-129  Shewanella putrefaciens CN-32  Bacteria  normal  0.52148  n/a   
 
 
-
 
NC_009901  Spea_1974  chromosome replication initiation inhibitor protein  73.47 
 
 
296 aa  461  1e-129  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0576454  n/a   
 
 
-
 
NC_008700  Sama_2987  chromosome replication initiation inhibitor protein  64.97 
 
 
299 aa  420  1e-116  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3749  transcriptional regulator, ArgP, LysR family  41.16 
 
 
303 aa  254  1.0000000000000001e-66  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3474  chromosome replication initiation inhibitor protein  42.04 
 
 
316 aa  245  6.999999999999999e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_3445  transcriptional regulator, ArgP, LysR family  42.23 
 
 
321 aa  241  1e-62  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03558  chromosome replication initiation inhibitor protein  41.64 
 
 
313 aa  241  1e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0034  chromosome replication initiation inhibitor protein  44.37 
 
 
298 aa  240  2e-62  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002477  chromosome initiation inhibitor  43.43 
 
 
298 aa  239  2.9999999999999997e-62  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1473  chromosome replication initiation inhibitor protein  42.8 
 
 
297 aa  236  3e-61  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2358  chromosome replication initiation inhibitor protein  41.16 
 
 
302 aa  234  1.0000000000000001e-60  Desulfovibrio vulgaris DP4  Bacteria  normal  0.17613  normal  0.155084 
 
 
-
 
NC_009431  Rsph17025_4249  chromosome replication initiation inhibitor protein  42.11 
 
 
298 aa  234  2.0000000000000002e-60  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.373423  normal  0.150215 
 
 
-
 
NC_009007  RSP_3862  chromosome replication initiation inhibitor protein  40.74 
 
 
299 aa  230  2e-59  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3409  transcriptional regulator ArgP, LysR family  40.48 
 
 
299 aa  229  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.305012  normal  0.0118196 
 
 
-
 
NC_007492  Pfl01_4483  chromosome replication initiation inhibitor protein  41.69 
 
 
297 aa  228  1e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.111794 
 
 
-
 
NC_011769  DvMF_2123  chromosome replication initiation inhibitor protein  39.43 
 
 
320 aa  228  1e-58  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.876879 
 
 
-
 
NC_003910  CPS_4135  chromosome replication initiation inhibitor protein  43.17 
 
 
298 aa  226  3e-58  Colwellia psychrerythraea 34H  Bacteria  normal  0.931472  n/a   
 
 
-
 
NC_012917  PC1_3684  chromosome replication initiation inhibitor protein  43.69 
 
 
297 aa  225  6e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1116  chromosome replication initiation inhibitor protein  43.43 
 
 
297 aa  225  9e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.472937 
 
 
-
 
NC_007974  Rmet_3863  chromosome replication initiation inhibitor protein  45.42 
 
 
298 aa  224  1e-57  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.807931 
 
 
-
 
NC_013421  Pecwa_3878  chromosome replication initiation inhibitor protein  43.34 
 
 
297 aa  223  2e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4361  chromosome initiation inhibitor  41.32 
 
 
299 aa  223  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0559  chromosome replication initiation inhibitor protein  42.47 
 
 
297 aa  223  4e-57  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0518  chromosome replication initiation inhibitor protein  42.12 
 
 
297 aa  220  1.9999999999999999e-56  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4057  chromosome replication initiation inhibitor protein  40.34 
 
 
299 aa  220  1.9999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0854  chromosome replication initiation inhibitor protein  43.34 
 
 
302 aa  220  1.9999999999999999e-56  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00300239  n/a   
 
 
-
 
NC_007963  Csal_2433  chromosome replication initiation inhibitor protein  40.73 
 
 
302 aa  220  1.9999999999999999e-56  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3925  chromosome replication initiation inhibitor protein  43.34 
 
 
297 aa  220  1.9999999999999999e-56  Serratia proteamaculans 568  Bacteria  normal  0.567079  normal 
 
 
-
 
NC_010465  YPK_0857  chromosome replication initiation inhibitor protein  43.34 
 
 
302 aa  220  1.9999999999999999e-56  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3821  chromosome replication initiation inhibitor protein  43.34 
 
 
302 aa  220  1.9999999999999999e-56  Yersinia pestis Angola  Bacteria  normal  0.353961  normal 
 
 
-
 
NC_010622  Bphy_1829  chromosome replication initiation inhibitor protein  41.55 
 
 
297 aa  219  3e-56  Burkholderia phymatum STM815  Bacteria  normal  0.999172  hitchhiker  0.00188164 
 
 
-
 
NC_011149  SeAg_B3225  chromosome replication initiation inhibitor protein  43.66 
 
 
297 aa  219  3.9999999999999997e-56  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0441076  n/a   
 
 
-
 
NC_011083  SeHA_C3299  chromosome replication initiation inhibitor protein  43.66 
 
 
297 aa  219  3.9999999999999997e-56  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.335083  normal 
 
 
-
 
NC_011080  SNSL254_A3302  chromosome replication initiation inhibitor protein  43.66 
 
 
297 aa  219  3.9999999999999997e-56  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.779303  normal 
 
 
-
 
NC_011094  SeSA_A3237  chromosome replication initiation inhibitor protein  43.66 
 
 
297 aa  219  3.9999999999999997e-56  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3404  chromosome replication initiation inhibitor protein  43.66 
 
 
297 aa  219  5e-56  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.269089  normal  0.216257 
 
 
-
 
NC_008709  Ping_1012  chromosome replication initiation inhibitor protein  39.85 
 
 
298 aa  218  7e-56  Psychromonas ingrahamii 37  Bacteria  normal  0.245419  normal 
 
 
-
 
NC_009656  PSPA7_4934  chromosome replication initiation inhibitor protein  41.61 
 
 
298 aa  218  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_009040  Rsph17029_4178  chromosome replication initiation inhibitor protein  40.74 
 
 
299 aa  217  2e-55  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.257723  normal  0.264843 
 
 
-
 
NC_011369  Rleg2_2144  chromosome replication initiation inhibitor protein  36.54 
 
 
297 aa  217  2e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.184842 
 
 
-
 
NC_009620  Smed_4164  chromosome replication initiation inhibitor protein  37.67 
 
 
299 aa  217  2e-55  Sinorhizobium medicae WSM419  Bacteria  normal  0.221393  normal  0.317315 
 
 
-
 
NC_007951  Bxe_A2962  chromosome replication initiation inhibitor protein  41.34 
 
 
297 aa  216  2.9999999999999998e-55  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0880  chromosome replication initiation inhibitor protein  40.58 
 
 
284 aa  216  2.9999999999999998e-55  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_56740  chromosome replication initiation inhibitor protein  39.66 
 
 
300 aa  216  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1507  chromosome replication initiation inhibitor protein  42.61 
 
 
297 aa  216  4e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2670  chromosome replication initiation inhibitor protein  41.16 
 
 
310 aa  215  7e-55  Burkholderia xenovorans LB400  Bacteria  normal  0.265415  normal 
 
 
-
 
NC_009436  Ent638_3334  chromosome replication initiation inhibitor protein  42.61 
 
 
297 aa  214  9.999999999999999e-55  Enterobacter sp. 638  Bacteria  normal  0.197754  normal 
 
 
-
 
CP001509  ECD_02747  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0983  chromosome replication initiation inhibitor protein  40.68 
 
 
296 aa  214  1.9999999999999998e-54  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00028343 
 
 
-
 
CP001637  EcDH1_0777  transcriptional regulator, ArgP, LysR family  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4212  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.307213  normal 
 
 
-
 
NC_010498  EcSMS35_3052  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_0794  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3074  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli HS  Bacteria  normal  0.093516  n/a   
 
 
-
 
NC_007908  Rfer_2058  chromosome replication initiation inhibitor protein  39.64 
 
 
303 aa  213  1.9999999999999998e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.215595  n/a   
 
 
-
 
NC_009801  EcE24377A_3243  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli E24377A  Bacteria  normal  0.361223  n/a   
 
 
-
 
NC_012892  B21_02710  hypothetical protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3336  chromosome replication initiation inhibitor protein  42.25 
 
 
297 aa  214  1.9999999999999998e-54  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3699  chromosome replication initiation inhibitor protein  40 
 
 
297 aa  213  2.9999999999999995e-54  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.792839 
 
 
-
 
NC_007951  Bxe_A1745  chromosome replication initiation inhibitor protein  44.28 
 
 
317 aa  212  5.999999999999999e-54  Burkholderia xenovorans LB400  Bacteria  normal  0.307823  normal  0.718712 
 
 
-
 
NC_012850  Rleg_2388  chromosome replication initiation inhibitor protein  36.24 
 
 
297 aa  211  7.999999999999999e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00311135  hitchhiker  0.00401295 
 
 
-
 
NC_002947  PP_0917  chromosome replication initiation inhibitor protein  41.97 
 
 
296 aa  211  1e-53  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3139  chromosome replication initiation inhibitor protein  39.93 
 
 
297 aa  211  1e-53  Burkholderia sp. 383  Bacteria  normal  0.677329  normal 
 
 
-
 
NC_010524  Lcho_0982  LysR family transcriptional regulator  39.13 
 
 
300 aa  210  2e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_0956  chromosome replication initiation inhibitor protein  41.61 
 
 
296 aa  209  3e-53  Pseudomonas putida F1  Bacteria  normal  0.480683  normal  0.474013 
 
 
-
 
NC_010322  PputGB1_4471  chromosome replication initiation inhibitor protein  39.66 
 
 
296 aa  210  3e-53  Pseudomonas putida GB-1  Bacteria  normal  normal  0.134322 
 
 
-
 
NC_008061  Bcen_5123  chromosome replication initiation inhibitor protein  39.58 
 
 
297 aa  209  4e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4487  chromosome replication initiation inhibitor protein  39.58 
 
 
297 aa  209  4e-53  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5736  chromosome replication initiation inhibitor protein  39.58 
 
 
297 aa  209  4e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.18075 
 
 
-
 
NC_008740  Maqu_1337  chromosome replication initiation inhibitor protein  38.06 
 
 
290 aa  209  5e-53  Marinobacter aquaeolei VT8  Bacteria  normal  0.449997  n/a   
 
 
-
 
NC_012856  Rpic12D_1704  chromosome replication initiation inhibitor protein  44.69 
 
 
298 aa  209  6e-53  Ralstonia pickettii 12D  Bacteria  normal  0.305056  normal 
 
 
-
 
NC_007348  Reut_B3693  chromosome replication initiation inhibitor protein  40.2 
 
 
306 aa  208  8e-53  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5298  chromosome replication initiation inhibitor protein  39.93 
 
 
297 aa  208  8e-53  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2974  chromosome replication initiation inhibitor protein  36.69 
 
 
303 aa  208  1e-52  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2012  chromosome replication initiation inhibitor protein  44.32 
 
 
298 aa  207  2e-52  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2509  chromosome replication initiation inhibitor protein  40.86 
 
 
303 aa  207  2e-52  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3162  chromosome replication initiation inhibitor protein  40.86 
 
 
303 aa  207  3e-52  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1573  chromosome replication initiation inhibitor protein  41.22 
 
 
318 aa  206  4e-52  Acidovorax citrulli AAC00-1  Bacteria  normal  0.187685  normal 
 
 
-
 
NC_010676  Bphyt_6516  chromosome replication initiation inhibitor protein  38.91 
 
 
310 aa  206  5e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0658  chromosome replication initiation inhibitor protein  36.79 
 
 
310 aa  205  7e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.117033  n/a   
 
 
-
 
NC_010002  Daci_2836  chromosome replication initiation inhibitor protein  38.55 
 
 
301 aa  205  9e-52  Delftia acidovorans SPH-1  Bacteria  normal  0.284111  normal  0.240548 
 
 
-
 
NC_008391  Bamb_5007  chromosome replication initiation inhibitor protein  39.22 
 
 
297 aa  204  1e-51  Burkholderia ambifaria AMMD  Bacteria  normal  0.633447  normal 
 
 
-
 
NC_007650  BTH_II0034  chromosome replication initiation inhibitor protein  38.87 
 
 
297 aa  203  2e-51  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3148  chromosome replication initiation inhibitor protein  39.22 
 
 
297 aa  204  2e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  0.99123  normal 
 
 
-
 
NC_009078  BURPS1106A_A0036  chromosome replication initiation inhibitor protein  38.26 
 
 
297 aa  204  2e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0050  chromosome replication initiation inhibitor protein  38.26 
 
 
297 aa  204  2e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1399  chromosome replication initiation inhibitor protein  36.58 
 
 
300 aa  204  2e-51  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3099  transcriptional regulator LysR family  40.15 
 
 
301 aa  203  3e-51  Agrobacterium vitis S4  Bacteria  normal  0.109242  n/a   
 
 
-
 
NC_011992  Dtpsy_0091  chromosome replication initiation inhibitor protein  36.12 
 
 
303 aa  203  3e-51  Acidovorax ebreus TPSY  Bacteria  normal  0.730131  n/a   
 
 
-
 
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