| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4471 |
|---|
| Symbol | |
|---|
| ID | 5872279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5002157 |
|---|
| End bp | 5003047 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641549606 |
|---|
| Product | chromosome replication initiation inhibitor protein |
|---|
| Protein accession | YP_001670695 |
|---|
| Protein GI | 167035464 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03298] transcriptional regulator, ArgP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.134322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT ACAAGCTCCT GGCTGCCCTC GCGGCGGTGA TCGAACAAGG TGGTTTCGAG
CGTGCGGCGC AAATACTGGG CTTGTCGCAA TCGGCCATCT CCCAGCGCAT CAAGCTGCTC
GAAGCGCGGG TTGGGCAGCC GGTGCTGGTG CGTGCCACGC CACCCAGCCC GACCGAAGTC
GGCCGCCAGT TGCTCAACCA CGTGCAGCAG GTGCGCCTGC TTGAACGTGA CTTGCAGCGC
CAGGTGCCGG CGCTGGATGA AGAGGGCATG CCGGAGCGCC TGCGCATAGC CCTCAACGCC
GATAGCCTGG CCACCTGGTG GGCCGGTGCG GTGGGCAATT TCTGTGCGCA ACAGAACGTG
CTGACCGACC TGGTGGTAGA AGACCAGGAG GTGGGCCTGA AACGCATGCG TGCTGGCGAA
GTGGCGGCCT GCCTGTGTGG CAGTGAACGC CCGGTAGCCG GCGCACGCAG CCTGCTACTG
GGGGCCATGC GTTACCGGGC GTTGGCCAGC CCCGGGTTCA TGGCGCGGCA TTTCCCCCAC
GGCTTCGTCG CCAGCCGCCT GGCCCGCACC CCGGCGATCG TGTACGGCCC GGATGATTTC
CTGCAGCATC GCTACCTGGC ATCGCTGGGC ATCGAGGACG GCTTCCTGCA CCACCTGTGC
CCGTCATCCG AAGGCTTCCT GCGCATGACC GAAGCCGGGT TGGGGTGGGG CCTGGTGCCA
GAACTGCAGG CCCAGGAGCA GCTGGCCAAC GGGCAATTGG TGGAAATCTG CCGCGATACC
CCTATCGATG TGCCGCTGTA CTGGCATCAT TGGCGCAATG GCGGGCAATT GCTCGCGCAA
CTGACCGACC ACCTGCGGTA CACCGCACGG CATTGGCTGG TGCCCTTGTA G
|
|---|
| Protein sequence | MFDYKLLAAL AAVIEQGGFE RAAQILGLSQ SAISQRIKLL EARVGQPVLV RATPPSPTEV
GRQLLNHVQQ VRLLERDLQR QVPALDEEGM PERLRIALNA DSLATWWAGA VGNFCAQQNV
LTDLVVEDQE VGLKRMRAGE VAACLCGSER PVAGARSLLL GAMRYRALAS PGFMARHFPH
GFVASRLART PAIVYGPDDF LQHRYLASLG IEDGFLHHLC PSSEGFLRMT EAGLGWGLVP
ELQAQEQLAN GQLVEICRDT PIDVPLYWHH WRNGGQLLAQ LTDHLRYTAR HWLVPL
|
|---|
| |